DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and CG18233

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster


Alignment Length:515 Identity:146/515 - (28%)
Similarity:247/515 - (47%) Gaps:57/515 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FARSVVNMDDMLNLEDDLVSNVEKLAEALARKAKTIKWGVFKMMKRRQEYKSSME---IFANPID 91
            ::.||:.:..:|.:|.:.:.|....|..|..|...:  .:|....:|..:|:..|   ..:||::
  Fly    31 YSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNL--NIFLDALKRPNHKTHNEREKFVSNPLN 93

  Fly    92 TFSLIRHMQSNWLMWLLYLETPVGQEELFFVDSRMPLLPKYFDFIDAAEGIRKMQATYQMFSSDI 156
            .|.|||.:..:|.....|.:.|:|.|:|..:...:...|:.||..:..:.:.:::.||.:...||
  Fly    94 AFGLIRRLNQDWPKLQNYTQKPLGLEQLTAMQDIVSAAPESFDMNEKLKAMHRIETTYDLQPKDI 158

  Fly   157 AKGLLDGVQYNSSLKPIDCLAIGLHLMNNSRWYAAEQWISASIEAYDQKSSQTDMELLRGPKLAD 221
            |||||...::|..|...||||:..|......:..:..|...:::.      .||           
  Fly   159 AKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKL------STD----------- 206

  Fly   222 LCRILGQVQMKQRNHEGALQAYQVAL-KLSPH------DPEIYEEYRILEKRDLTLSDIEPI--E 277
                 |.:::..|..|..|:.:..|: |.|.:      ..|..::....:.:|..|.|:|.:  .
  Fly   207 -----GSLEIMNRLKEIELKGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISS 266

  Fly   278 QDKDNSHERLVLPPC-----CSGRCQVPRNLSNLYCVYNHVTSPFLQLAPIKTEILSIDPFVVLL 337
            :.|...::....||.     |.|  ..|:. |||.|.||..|:.||:|||:|.|.:|.||::|:.
  Fly   267 ELKQWINDDSTTPPTDHNLGCRG--LFPKK-SNLVCRYNSSTNAFLKLAPLKMEEISRDPYIVMF 328

  Fly   338 HDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDTYRTSKSVWYSSDFNDTTKKITERLGD 402
            |::||.|:...::....|  :.:..|   :..|..::    .|:..|...: :..:|:|.:|:.|
  Fly   329 HEVISDKDIEEMKGEITE--MENGWT---SLGDPKEI----VSRVYWIRKE-SSFSKRINQRISD 383

  Fly   403 ATGLDMNSTEFYQVINYGLGGFFETHLDML---LSEKNRFNGTSDRIATTLFYLNEVRQGGGTYF 464
            .||..:......|:.|:|:||:|:.|.|..   |.|.:..|...|||.:.:||..||.|||.|.|
  Fly   384 MTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVNNTLGDRIGSIIFYAGEVSQGGQTVF 448

  Fly   465 PRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMSKWINDMGQEFTRPC 524
            |.|.:.|.|:.|:||||:|..........|||:.|||:|||:|.::||::...|.|.:||
  Fly   449 PDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPC 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 34/130 (26%)
TPR repeat 175..200 CDD:276809 5/24 (21%)
TPR_16 176..254 CDD:290168 13/84 (15%)
TPR repeat 219..249 CDD:276809 5/30 (17%)
TPR_2 220..253 CDD:285020 7/39 (18%)
P4Hc 342..513 CDD:214780 57/173 (33%)
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 34/130 (26%)
ATP-synt_B <198..278 CDD:304375 15/101 (15%)
P4Hc 333..498 CDD:214780 58/174 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461791
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.910

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