DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and P4ha3

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:562 Identity:151/562 - (26%)
Similarity:243/562 - (43%) Gaps:124/562 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DDLVSNVEKLAEALARKAKTIKWGVFKMMKRRQE---------YKSSMEI-------FANPIDTF 93
            :|..|.:..:|.|||.:.:.:  |..:...|.:|         |...:.:       ..||:..|
Mouse    26 EDTFSALTSVARALAPERRLL--GTLRRYLRGEEARLRDLTRFYDKVLSLHEDLKIPVVNPLLAF 88

  Fly    94 SLIRHMQSNWLMWLLYLET------------PVGQEELFFVDSRMPLLPKYFDFIDAAEGIRKMQ 146
            :||:.:||:|...:..||.            .|.|:           ||.:.|...||..:.::|
Mouse    89 TLIKRLQSDWRNVVHSLEATENIRALKDGYEKVEQD-----------LPAFEDLEGAARALMRLQ 142

  Fly   147 ATYQMFSSDIAKGLLDGVQYNS-----------SLKPIDCLAIG--------LHL-MNNSRWYAA 191
            ..|.:....:|:|:...|..:|           ||...||..:|        |.: .:...:|.|
Mouse   143 DVYMLNVKGLARGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKPSCGSRSLQVAYDTGDYYHA 207

  Fly   192 EQWISASIEAY----------DQKSSQTDMELLRGPKLADLCRILGQVQMKQRNHEGALQAYQVA 246
            ..|:..::..:          |:.|.:..::.     ||..|..:|.|..       ||...:..
Mouse   208 IPWLEEAVSLFRRAHGEWKTEDEASLEDALDY-----LAFACFQVGNVSC-------ALSLSREF 260

  Fly   247 LKLSPHDPEI------YEEYRILEKRDLTLSDIEPIE-------QDKDNSHERLVLPPCCSGRCQ 298
            |..||.:..:      ||  |:|.:....::....|:       |.:| ::|         |.||
Mouse   261 LVYSPDNKRMARNVLKYE--RLLAENGHQMAAETAIQRPNVPHLQTRD-TYE---------GLCQ 313

  Fly   299 V----PRN--LSNLYCVYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHM 357
            .    |.:  :.:|||.|...:||:|.|.|.:.|::.:.|.:.|.||.:|.:|:..||..::..:
Mouse   314 TLGSQPTHYQIPSLYCSYETNSSPYLLLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWL 378

  Fly   358 LPSATTDPDASDDETQVDTYRTSKSVWYSSDFNDTTKKITERLGDATGLDMNS--TEFYQVINYG 420
            ..|...   :.:.:.||: ||.|||.|.....:.....:..|:...||||:..  .|:.||:|||
Mouse   379 QRSVVA---SGEKQLQVE-YRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYG 439

  Fly   421 LGGFFETHLDMLLSEKN---RFNGTSDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWY 482
            :||.:|.|.|...|..:   |.. :.:|:||.:.||:.|..||.|.|...|.:|.....:||||:
Mouse   440 IGGHYEPHFDHATSPSSPLYRMK-SGNRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWW 503

  Fly   483 NLDTKGNDHMGSLHTGCPVIVGSKWVMSKWINDMGQEFTRPC 524
            ||...|.....:||.||||:||.|||.:|||::.||||.|||
Mouse   504 NLHRSGEGDGDTLHAGCPVLVGDKWVANKWIHEYGQEFRRPC 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 31/143 (22%)
TPR repeat 175..200 CDD:276809 6/33 (18%)
TPR_16 176..254 CDD:290168 17/96 (18%)
TPR repeat 219..249 CDD:276809 8/29 (28%)
TPR_2 220..253 CDD:285020 9/32 (28%)
P4Hc 342..513 CDD:214780 62/175 (35%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 29/138 (21%)
P4Hc 363..535 CDD:214780 63/176 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839349
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4458
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.790

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