DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and P4htm

DIOPT Version :10

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001386206.1 Gene:P4htm / 301008 RGDID:1311848 Length:503 Species:Rattus norvegicus


Alignment Length:413 Identity:96/413 - (23%)
Similarity:140/413 - (33%) Gaps:159/413 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 SLKPI-----------DCLAIGLHL-----MNNSRWYAAEQWISASIEAYDQKSSQTDMELLRGP 217
            ||||:           :|..| :||     :..|:....|::..|             |..:|..
  Rat   140 SLKPLLFEIPGFLSDEECRLI-IHLAQMKGLQRSQILPTEEYEEA-------------MSAMRVS 190

  Fly   218 KLADLCRILGQVQMKQRNHEGALQAYQVALKLSPHDPEIYEEYRILEKRDLTLSDIEPIEQDKDN 282
            :| ||.::|.|      ||:|.||..:|.                                    
  Rat   191 QL-DLFQLLDQ------NHDGRLQLREVL------------------------------------ 212

  Fly   283 SHERLVLPPCCSGRCQVPRNLSNLYCVYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKEST 347
            :..||     .:||...|.|:..:|..        ::..|....:||:..|        |..:..
  Rat   213 AQTRL-----GNGRWMTPENIQEMYSA--------IKADPDGDGVLSLQEF--------SNMDLR 256

  Fly   348 LIRTSSKEHMLPSATTDPDASDDETQVDTYRTSKSVW--YSSDFNDTTKKITERLGDATGLD--- 407
            ......:.|...|:             :..|.|...|  .....:...:.|.:|:...|.|.   
  Rat   257 DFHKYMRSHKAESS-------------ELVRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEI 308

  Fly   408 MNSTEFYQVINYGLGGFFETHLD--------------MLLSEKNRFNGTSDRIATTLFYLNEVRQ 458
            :..:|..||:.||.||.:..|:|              ::.:|...|. ||.|..|.|||||.|..
  Rat   309 VELSEPLQVVRYGEGGHYHAHVDSGPVYPETVCSHTKLVANESVPFE-TSCRYMTVLFYLNNVTG 372

  Fly   459 GGGTYFP---------------------------RLNLTVFPQPGSALFWYNLDTKGNDHMG--- 493
            ||.|.||                           :.||.|.||.|:|:||||....|...:|   
  Rat   373 GGETVFPVADNRTYDEMSLIQDNVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVD 437

  Fly   494 --SLHTGCPVIVGSKWVMSKWIN 514
              |||.||.|..|:||:.:.|||
  Rat   438 DYSLHGGCLVTRGTKWIANNWIN 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433
TPR repeat 175..200 CDD:276809 7/29 (24%)
TPR_16 176..254 CDD:433202 19/82 (23%)
NrfG 217..>260 CDD:443378 11/42 (26%)
TPR repeat 219..249 CDD:276809 11/29 (38%)
P4Hc 342..513 CDD:214780 58/221 (26%)
P4htmNP_001386206.1 EF-hand_7 193..253 CDD:463900 22/122 (18%)
P4Hc 247..459 CDD:214780 59/233 (25%)
Blue background indicates that the domain is not in the aligned region.

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