DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and phy-3

DIOPT Version :10

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_507251.2 Gene:phy-3 / 188624 WormBaseID:WBGene00004026 Length:318 Species:Caenorhabditis elegans


Alignment Length:217 Identity:61/217 - (28%)
Similarity:94/217 - (43%) Gaps:19/217 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 VYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQ 373
            |||        :.|:..||:|..|.:|:..:::|.:::.......::..|....|    ||..|.
 Worm    77 VYN--------MLPVDMEIISWAPTLVIYRNLMSPRQTASFLNFIEQRDLEIQKT----SDFGTS 129

  Fly   374 VDT--YRTSKSVWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEK 436
            ::|  .|.:.|.....|.|.|.:...:......||::...|.:..::|..||.:..|.|.|....
 Worm   130 IETTHRRANGSFIPPEDSNVTVEIKMQAQKRIPGLNLTVAEHFSALSYLPGGHYAVHYDYLDYRS 194

  Fly   437 NR-----FNGTSDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLH 496
            .:     .|.|.:||.|.:|.|....:||||.||.:..||....|.|.||:|........|.|.|
 Worm   195 KQDYDWWMNKTGNRIGTLIFVLKPAEKGGGTVFPSIGSTVRANAGDAFFWFNAQADEEKEMLSNH 259

  Fly   497 TGCPVIVGSKWVMSKWINDMGQ 518
            .|||:..|.|.:.:.||....|
 Worm   260 GGCPIYEGRKVIATIWIRAYNQ 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433
TPR repeat 175..200 CDD:276809
TPR_16 176..254 CDD:433202
NrfG 217..>260 CDD:443378
TPR repeat 219..249 CDD:276809
P4Hc 342..513 CDD:214780 49/177 (28%)
phy-3NP_507251.2 P4Hc 102..277 CDD:214780 50/178 (28%)
Blue background indicates that the domain is not in the aligned region.

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