DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaNE2 and P4ha2

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_006532515.1 Gene:P4ha2 / 18452 MGIID:894286 Length:557 Species:Mus musculus


Alignment Length:578 Identity:170/578 - (29%)
Similarity:260/578 - (44%) Gaps:86/578 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RLVLLGMLYLSLSFGQLRENNAQQRFARSVVNMDDMLNLEDDLVSNVEK--LAEALARKAKTIKW 67
            :|.:|.::.|...||.|  :..|..|..|:.:|.|::..|.|||.::::  |.|. |:.||...|
Mouse     2 KLQVLVLVLLMSWFGVL--SWVQAEFFTSIGHMTDLIYAEKDLVQSLKEYILVEE-AKLAKIKSW 63

  Fly    68 GVFKMMKRRQEYKSSME-IFANPIDTFSLIRHMQSNW--LMWLLYLETPVG-------QEELFFV 122
             ..||........:..| ..|:|::.:.|::.:.::|  |..|:..:...|       |.:.|..
Mouse    64 -ASKMEALTSRSAADPEGYLAHPVNAYKLVKRLNTDWPALGDLVLQDASAGFVANLSVQRQFFPT 127

  Fly   123 DSRMPLLPKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSR 187
            |.         |...||..:.::|.||::....|::|.|.|.:|.:.|...||..:|....|...
Mouse   128 DE---------DESGAARALMRLQDTYKLDPDTISRGELPGTKYQAMLSVDDCFGLGRSAYNEGD 183

  Fly   188 WYAAEQW-------ISASIEAYDQKSSQTDMELLRGPKLADLCRILGQVQMKQR------NHE-- 237
            :|....|       :.|..||...||...|.......:|.||.|   .|::.:|      :||  
Mouse   184 YYHTVLWMEQVLKQLDAGEEATVTKSLVLDYLSYAVFQLGDLHR---AVELTRRLLSLDPSHERA 245

  Fly   238 -GALQAYQVALKLSPHDPEIYEEYR---ILEKRDLTLSDIEPI-EQDKDNSHERLVLPPCCSGR- 296
             |.|:.::          .:.||.|   :..:.|..|:..|.: |:..|...||.|....|.|. 
Mouse   246 GGNLRYFE----------RLLEEERGKSLSNQTDAGLATQENLYERPTDYLPERDVYESLCRGEG 300

  Fly   297 -CQVPRNLSNLYCVYNHVTS-PFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLP 359
             ...||....|:|.|:|... |.|.:||.|.|.....|.:|..:|::|.:|...|:..:|..:..
Mouse   301 VKLTPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLAR 365

  Fly   360 SATTDPDASDDETQVDTYRTSKSVWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGF 424
            :...||...  ...|.:||.|||.|...|.:....::..|:...|||.:.:.|..||.|||:||.
Mouse   366 ATVRDPKTG--VLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQ 428

  Fly   425 FETHLDM--------LLSEKNRFN---------------GTSDRIATTLFYLNEVRQGGGTYFPR 466
            :|.|.|.        |.:|.||..               ||.:|:||.|.|:::|..||.|.||.
Mouse   429 YEPHFDFSRRPFDSGLKTEGNRLATFLNYSDEQDAFKRLGTGNRVATFLNYMSDVEAGGATVFPD 493

  Fly   467 LNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMSKWINDMGQEFTRPC 524
            |...::|:.|:|:|||||...|.....:.|..|||:||.|||.:||.::.||||.|||
Mouse   494 LGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPC 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 34/139 (24%)
TPR repeat 175..200 CDD:276809 6/31 (19%)
TPR_16 176..254 CDD:290168 20/93 (22%)
TPR repeat 219..249 CDD:276809 10/38 (26%)
TPR_2 220..253 CDD:285020 9/41 (22%)
P4Hc 342..513 CDD:214780 66/193 (34%)
P4ha2XP_006532515.1 P4Ha_N 28..157 CDD:369820 34/139 (24%)
P4Hc 348..541 CDD:214780 67/194 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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