DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and phy-2

DIOPT Version :10

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:548 Identity:159/548 - (29%)
Similarity:254/548 - (46%) Gaps:42/548 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RLVLLGMLYLSLSFGQLRENNAQQRFARSVVNMDDMLNLEDDLVSNVEKLAEALARKAKTIKWGV 69
            |.|||..|...|:...|         ..::.::..||..|.|:.:.:::..||...:...::...
 Worm     2 RAVLLVCLLAGLAHADL---------FTAIADLQHMLGAEKDVTTIIDQYIEAERARLDDLRRYA 57

  Fly    70 FKMMKRRQEYKS-SMEIFANPIDTFSLIRHMQSNW-LMWLLYLETPVGQEELFFVDSRM---PLL 129
            .:.:.|....:| ..|...|||:.:.||:.:.:.| .:..:.|............|:|:   ...
 Worm    58 HEYVHRNAHAESVGPEFVTNPINAYLLIKRLTTEWKKVENIMLNNKASTFLKNITDNRVRSEVKF 122

  Fly   130 PKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSRWYAAEQW 194
            |...|...||..:.::|.||.:.:.|::.|::.|.:.::.|...|...:|....|...:|....|
 Worm   123 PGEEDLSGAATALLRLQDTYSLDTLDLSNGIIGGEKVSNKLSGHDTFEVGRSAYNQKDYYHCLMW 187

  Fly   195 ISASIEAYDQKSSQTDMELLRGPKLADLCRILGQVQMKQRNHEGALQAYQVALKLSPHDPEI--- 256
            :..::...:.::..|..|.       ::...|.....:|.|...||...:...|::|:.|..   
 Worm   188 MQVALVKIENENPPTIEEW-------EILEYLAYSLYQQGNVRRALSLTKRLAKIAPNHPRAKGN 245

  Fly   257 ---YEEYRILEKRDLTLSDIEPIEQDK---DNSHERLVLPPCCSGRCQ--VPRNLSNLYCVYNHV 313
               ||:  :|:.:|: :.|:.||...:   |...||......|.|...  .|:..:.|.| |...
 Worm   246 VKWYED--MLQGKDM-VGDLPPIVNKRVEYDGIVERDAYEALCRGEIPPVEPKWKNKLRC-YLKR 306

  Fly   314 TSPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDTYR 378
            ..|||:|||||.|||..||..||..::|...|..:|:..:...:  ...|..::...|.:..|||
 Worm   307 DKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKL--KRATVQNSKTGELEHATYR 369

  Fly   379 TSKSVWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDML-LSEKNRFN-- 440
            .|||.|...|.:....::..|:.|.|.|:..::|..||.||||||.::.|.|.. ..|||.|.  
 Worm   370 ISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTL 434

  Fly   441 GTSDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGS 505
            .|.:||||.|||:::..:||.|.|..|...|||....|||||||...|...:.:.|..|||::|.
 Worm   435 NTGNRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGV 499

  Fly   506 KWVMSKWINDMGQEFTRPC-VESSLSSN 532
            |||.:|||::.|||||||| :|..:..|
 Worm   500 KWVSNKWIHEKGQEFTRPCGLEEEVQEN 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433 27/134 (20%)
TPR repeat 175..200 CDD:276809 4/24 (17%)
TPR_16 176..254 CDD:433202 13/77 (17%)
NrfG 217..>260 CDD:443378 10/48 (21%)
TPR repeat 219..249 CDD:276809 5/29 (17%)
P4Hc 342..513 CDD:214780 64/173 (37%)
phy-2NP_502317.1 P4Ha_N 21..156 CDD:462433 27/134 (20%)
P4Hc 335..508 CDD:214780 65/174 (37%)

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