DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and p4ha3

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_031752143.1 Gene:p4ha3 / 100495824 XenbaseID:XB-GENE-962355 Length:547 Species:Xenopus tropicalis


Alignment Length:531 Identity:144/531 - (27%)
Similarity:238/531 - (44%) Gaps:56/531 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SVVNMDDMLNLEDDLVSNVEKLAEALARKAKTIKWGVFKMMKRRQEYKSSMEIFANPIDTFSLIR 97
            |:.::...:.:|..|:.::.:..:...::...::....|:....|.....::   :||..::|::
 Frog    34 SMASIQQAVGMEGALLQHLGQYLQQETQRLSDLRRFYEKVQASHQAGGPPVQ---DPILAYTLLK 95

  Fly    98 HMQSNWLMWLLYLET-------PVGQEELFFVDSRMPLLPKYFDFIDAAEGIRKMQATYQMFSSD 155
            .:||.|:..:...|.       ..|.|::      ...||...|...||:.:.::|..|.:..:.
 Frog    96 RLQSEWMNVVHSSEANENIQALKEGYEKV------KQDLPAPEDVEGAAKALMRLQDVYSLNVNG 154

  Fly   156 IAKGLLD-------GVQYN----SSLKPIDCLAIGLHLMNNSRWYAAEQWISASIEAYDQKSSQT 209
            :|:|:..       .:.||    |.:...||..||....:...:|.:..|:..::..:  :.|..
 Frog   155 LARGMFQRSSSSDTKLLYNPPHLSIMSADDCFHIGKVAYDMEDYYHSIPWLEEAVSRF--RGSYG 217

  Fly   210 DMELLRGPKLADLCRILGQVQMKQRNHEGALQAYQVALKLSPHDPEI------YEEYRILEKRDL 268
            :........|.:....|.....|..|...||...:..|...|.:..:      ||:  ||.:...
 Frog   218 NWRTEDEGSLEEALDYLAFSYYKAGNISHALDLSRECLLYDPDNGRLARNIAKYEQ--ILYESPT 280

  Fly   269 TLSDIEPIEQDKDN-SHERLVLPPCCSGRCQVPRNLSNLY------CVYNHVTSPFLQLAPIKTE 326
            ..:|.|.::..:.| :|  |.......|.||...:....|      |:|:..:.|:|.|.|:|.|
 Frog   281 ADADAEEMKLQRPNVTH--LKTRDLYEGLCQTLGSQPTSYEDPHMSCMYDTNSHPYLLLQPMKKE 343

  Fly   327 ILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDTYRTSKSVWYSSDFND 391
            |:|:.|.|||.||.:|..|:..|    ||...|.......||.::.....||.|||.|.....:.
 Frog   344 IVSLRPQVVLYHDFVSDLEAEKI----KELASPWLHRSVVASGEKQAEAEYRISKSAWLKDTIHP 404

  Fly   392 TTKKITERLGDATGLDMNS--TEFYQVINYGLGGFFETHLDMLLSEKN---RFNGTSDRIATTLF 451
            ..:.:..|:...|||:.:.  .|:.||:|||:||.:|.|.|...|.|:   |.| |.:|:||.:.
 Frog   405 FVQNLDTRISAVTGLNAHPPYAEYLQVVNYGIGGHYEPHFDHATSRKSPLYRTN-TGNRLATFMI 468

  Fly   452 YLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMSKWINDM 516
            ||:.|..||.|.|...|.:......:|:||:||...|.....:||.|||||:|||||.:|||::.
 Frog   469 YLSHVDLGGSTAFVFANFSSPVVKNAAVFWWNLHRNGLGDEDTLHAGCPVIIGSKWVANKWIHEF 533

  Fly   517 GQEFTRPCVES 527
            ||||.|||..|
 Frog   534 GQEFHRPCGRS 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 23/134 (17%)
TPR repeat 175..200 CDD:276809 5/24 (21%)
TPR_16 176..254 CDD:290168 13/77 (17%)
TPR repeat 219..249 CDD:276809 7/29 (24%)
TPR_2 220..253 CDD:285020 7/32 (22%)
P4Hc 342..513 CDD:214780 64/175 (37%)
p4ha3XP_031752143.1 P4Ha_N 35..>104 CDD:400573 10/71 (14%)
TPR repeat 182..210 CDD:276809 6/27 (22%)
TPR repeat 215..257 CDD:276809 8/41 (20%)
P4Hc 359..531 CDD:214780 65/176 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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