DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15539 and P4HA2

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001136071.1 Gene:P4HA2 / 8974 HGNCID:8547 Length:535 Species:Homo sapiens


Alignment Length:526 Identity:152/526 - (28%)
Similarity:247/526 - (46%) Gaps:61/526 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LENNYAISIYDMSKLIDYEHYLLNILQKF-------ANALQKRVDTLEYYLEMTDYDREKNLAED 83
            ::..:..||..|:.||..|..|:..|:::       .:.::...:.:|.....:..|.|..||. 
Human    19 VQAEFFTSIGHMTDLIYAEKELVQSLKEYILVEEAKLSKIKSWANKMEALTSKSAADAEGYLAH- 82

  Fly    84 PIKHFRITRRLHSDYVNWVWFMEEQPWGTLVKDIIAIAPEMPTLKDVEEAIRGLRLIQWTYSLPT 148
            |:..:::.:||::|:......:.:......:.::.......||.:|...|.:.|..:|.||.|..
Human    83 PVNAYKLVKRLNTDWPALEDLVLQDSAAGFIANLSVQRQFFPTDEDEIGAAKALMRLQDTYRLDP 147

  Fly   149 AEMAKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMVGLKMYEADEEIEYIYSQLGMP 213
            ..:::|.|....:...|....|..:.|...|..|:.....|:...||..:|.||.....||    
Human   148 GTISRGELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQVLKQLDAGEEATTTKSQ---- 208

  Fly   214 LVDFYELFVEIQDELGSRYLAMSELQLAIKNWPEKVSLQRALSRLKMNIRIGKEPAEKKNK---- 274
                      :.|.|......:.:|..|::.....:||..:..|...|:|..::..|::.:    
Human   209 ----------VLDYLSYAVFQLGDLHRALELTRRLLSLDPSHERAGGNLRYFEQLLEEEREKTLT 263

  Fly   275 ----------------------SKRVYKKCCSSE-----CRPTAKLYCLY-KTTSSYFLRLAPLK 311
                                  .:.||:..|..|     .|...:|:|.| ....:..|.:||.|
Human   264 NQTEAELATPEGIYERPVDYLPERDVYESLCRGEGVKLTPRRQKRLFCRYHHGNRAPQLLIAPFK 328

  Fly   312 MELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLAR-TVTVSKDGNYTEDPDRTTKGTWLVE-NNA 374
            .|.....|::|.::||:||::|..|:.:.|.|||| ||...|.|..|....|.:|.:||.| ::.
Human   329 EEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDP 393

  Fly   375 LIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDFLEDAELDNF-----SDRIATAVFYL 434
            ::.|:::..|.:|...:..|:..||.|||:||.|..||||..:.|.|.|     .:|:||.:.|:
Human   394 VVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYM 458

  Fly   435 SDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKGDGDNRTAHSACPTVVGSRWVMTKWINEREQ 499
            |||..||||:||.||.:::||||:|:.||||...|:||.||.|:|||.:||.:||..||.:||.|
Human   459 SDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQ 523

  Fly   500 IFRRPC 505
            .|.|||
Human   524 EFLRPC 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 27/129 (21%)
P4Hc 329..494 CDD:214780 76/171 (44%)
P4HA2NP_001136071.1 P4Ha_N 26..155 CDD:311993 27/129 (21%)
TPR 207..240 8/46 (17%)
P4Hc 346..519 CDD:214780 77/172 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.