DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15539 and AT5G18900

DIOPT Version :10

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_197391.1 Gene:AT5G18900 / 832008 AraportID:AT5G18900 Length:298 Species:Arabidopsis thaliana


Alignment Length:221 Identity:60/221 - (27%)
Similarity:104/221 - (47%) Gaps:26/221 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 TTSSYFLRLAPLKMELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLARTVTVSKDGNYTEDPD-R 362
            ::||.|:.  |.|::.:|..|...::...:::.:...:.:|.|..|.|:.....|...::..: |
plant    26 SSSSVFVN--PSKVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSGESKFSEVR 88

  Fly   363 TTKGTWLVE-NNALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDFLED-AELDNFSD 425
            |:.||::.: .:.::..:.......|.....:.:..|||.|..|..|..|||:..| ..:.....
plant    89 TSSGTFISKGKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRGGH 153

  Fly   426 RIATAVFYLSDVPQGGATIFP---------------------KLGLSVFPKKGSALLWYNLDHKG 469
            |:||.:.|||:|.:||.|:||                     |.|::|.|:||.|||::||....
plant   154 RMATILMYLSNVTKGGETVFPDAEIPSRRVLSENKEDLSDCAKRGIAVKPRKGDALLFFNLHPDA 218

  Fly   470 DGDNRTAHSACPTVVGSRWVMTKWIN 495
            ..|..:.|..||.:.|.:|..||||:
plant   219 IPDPLSLHGGCPVIEGEKWSATKWIH 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..158 CDD:462433
P4Hc 329..494 CDD:214780 51/188 (27%)
AT5G18900NP_197391.1 PLN00052 33..298 CDD:177683 57/214 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.