DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15539 and p4ha3

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_021322008.1 Gene:p4ha3 / 563281 ZFINID:ZDB-GENE-041010-4 Length:616 Species:Danio rerio


Alignment Length:540 Identity:145/540 - (26%)
Similarity:241/540 - (44%) Gaps:87/540 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ILYLLVLV-KSHSK--PKILENNYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLEM 71
            :||||.:. :|..:  ..:|..|.|:|.  ..||||  |.::.|    .:..|:..|...::..:
Zfish    10 VLYLLNMPDESFGEMFTSMLSVNQAVSA--ERKLID--HLIIYI----EHEAQRLEDIKRFFSRV 66

  Fly    72 TD-----YDREKNLAEDPIKHFRITRRLHSDYVNWVWFME-EQPWGTLVKDIIAIAPEMPTLKDV 130
            |.     |:...:...:||..|::.:||.|:::|.|...| |:....|.:|...:...:|.|:|:
Zfish    67 TSLHDGIYNEPSDPIANPIAAFKLVKRLKSEWLNVVHSTEAEENIKVLREDYRRMESSLPKLEDL 131

  Fly   131 EEAIRGLRLIQWTYSLPTAEMAKGVLQDIHH---------NTSLDGMQCITIARHMVNYKDFIRA 186
            ..|..||..:|..|:|....:.:|..|.|..         :..|.|..|..:.:...:.:|:..:
Zfish   132 RGAAHGLMRLQDVYNLHVESLVRGHFQQISDPVDFYKLSVSDMLSGDDCFLVGKVAYDLEDYYHS 196

  Fly   187 KEWLMVGLKMYEADEEIEYIYSQLGMPLVDFYELFVEIQDELGSRYLAMSELQLAIKNWPEKVSL 251
            ..|....::::...|     :|.         |....::|.|.  :||.|..:..  |....:||
Zfish   197 VLWFEEAVRLFRGTE-----WSP---------ENEGTLEDALD--HLAFSHFKTG--NISHALSL 243

  Fly   252 QRAL-------SRLKMNIRIGKE------PAEKKN-----------KSKRVYKKCCSSE-CRP-- 289
            .|.|       .|:..|:...::      ||....           :::..|::.|.:: .:|  
Zfish   244 SRELLLHDPMNRRVHFNVEKYEKLLNENLPATSSGLTLKRPDGIYLRTRNAYEQLCQTKGSQPKH 308

  Fly   290 --TAKLYCLYKTTSSYFLRLAPLKMELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLARTVTVSK 352
              ...|:|.|.|..|..|.|.|::.|::||.||:||||..|:..:..:||......|.|:|..|.
Zfish   309 FENPSLFCDYFTNGSPALFLQPIRREIISLQPYVVLFHGFVTQAEAKNIRKYAMPGLRRSVVASG 373

  Fly   353 DGNYTEDPDRTTKGTWLVEN-NALIQRLSQLTQDMTNFDIHD--ADPFQVLNYGIGGFYGIHFDF 414
            ....|.: .|.:|..||.|: :.::.:|.|....:|..::..  |:..||:||||||.|..||| 
Zfish   374 MNQATAE-YRISKSAWLKESAHEVVGKLDQRITLVTGLNVQPPYAEYLQVVNYGIGGHYEPHFD- 436

  Fly   415 LEDAELDN-------FSDRIATAVFYLSDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKGDGD 472
              .|..|:       ..:|:||.:.|||.|..||:|.|.....||...:.:||.|:||...|.|:
Zfish   437 --HATSDSSPLYRLKTGNRVATIMIYLSPVQAGGSTAFIYANFSVPVVQNAALFWWNLHKNGQGN 499

  Fly   473 NRTAHSACPTVVGSRWVMTK 492
            ..|.|:.||.:||::|.|.|
Zfish   500 VDTLHAGCPVIVGNKWGMFK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 33/128 (26%)
P4Hc 329..494 CDD:214780 59/174 (34%)
p4ha3XP_021322008.1 P4Ha_N 27..157 CDD:311993 36/137 (26%)
P4Hc 350..519 CDD:214780 58/172 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583400
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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