DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15539 and p4ha1a

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_009304776.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:541 Species:Danio rerio


Alignment Length:564 Identity:164/564 - (29%)
Similarity:275/564 - (48%) Gaps:99/564 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLAILYLLVLVKSHSKPKILENNYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLEM 71
            |:....|:.|:||.|    ..:::..||..|:.|:..|..|:..|:.:..|.:.:::.::.:.|.
Zfish     6 SVCCFLLISLLKSSS----AHSDFFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAEK 66

  Fly    72 TD-------YDREKNLAEDPIKHFRITRRLHSDYVNWVWFMEEQPWG----TLVKDI-------I 118
            .|       .|.|..|.. |:..|::.:||:::            ||    .::||:       :
Zfish    67 LDALTATAVQDPEGFLGH-PVNAFKLMKRLNTE------------WGEVEDLVLKDMSDGFISNL 118

  Fly   119 AIAPE-MPTLKDVEEAIRGLRLIQWTYSLPTAEMAKGVLQDIH----HNTSLDGMQCITIARHMV 178
            .|..: .|..:|...|.:.|..:|.||.|.|..::.|.|..::    :.::|....|..:.:...
Zfish   119 TIQRQYFPNDEDQNGAAKALLRLQDTYKLDTQTISSGDLPGVNTGLPYKSTLTVEDCFELGKIAY 183

  Fly   179 NYKDFIRAKEWLMVGLKMYEADEE--IEYIYSQLGMPLVDFYELFVEIQDELGSRYLAMSELQLA 241
            :..|:...:.|:...||..:..||  :|...:      :|:....|..|.|| .|.|..::..|.
Zfish   184 SDADYYHTELWMAQALKQLDEGEESSVEIATA------LDYLSYSVYQQGEL-ERALEYTKRLLT 241

  Fly   242 IKNWPEKVSLQRALSRLK-MNIRIGKEPAEKKNKS---------------------KRVYKKCCS 284
            ::  ||.   ||||..|| .:.::.|:...:|.:|                     ||.|:|.|.
Zfish   242 VE--PEH---QRALGNLKYFDYQLAKQKKAEKEQSTKEESKKEQETSDGKKEYLPEKRKYEKLCR 301

  Fly   285 SE-----CRPTAKLYCLYKTTSSY-FLRLAPLKMELLSLDPYMVLFHDVVSDKDIVSIRNLTKGK 343
            .|     .|....|:|.|...:.: |..:.|:|.|.....|.::.:|:::::::|..|:.|:|.:
Zfish   302 GEGLKMTPRRQKHLFCRYFNGNRHPFYTIGPVKQEDEWDRPRIIRYHEIITEQEIEKIKELSKPR 366

  Fly   344 LAR-TVT-----VSKDGNYTEDPDRTTKGTWLVE-NNALIQRLSQLTQDMTNFDIHDADPFQVLN 401
            |.| |::     |.:..:|     |.:|..||.. .:.::.|::|..:|:|..::..|:..||.|
Zfish   367 LRRATISNPITGVLETAHY-----RISKSAWLAAYEHPVVDRINQRIEDITGLNVKTAEELQVAN 426

  Fly   402 YGIGGFYGIHFDFLEDAELDNFSD-----RIATAVFYLSDVPQGGATIFPKLGLSVFPKKGSALL 461
            ||:||.|..||||....|.|.|.:     ||||.:||:|||..||||:||::|.:|.|.||:|:.
Zfish   427 YGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVF 491

  Fly   462 WYNLDHKGDGDNRTAHSACPTVVGSRWVMTKWINEREQIFRRPC 505
            ||||...|:||..|.|:|||.:||::||..|||:||.|.|||||
Zfish   492 WYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPC 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 32/141 (23%)
P4Hc 329..494 CDD:214780 71/176 (40%)
p4ha1aXP_009304776.1 P4Ha_N 28..157 CDD:285528 32/141 (23%)
TPR repeat 172..207 CDD:276809 5/34 (15%)
TPR repeat 212..242 CDD:276809 8/36 (22%)
Fis1 218..262 CDD:304536 15/49 (31%)
P4Hc 352..525 CDD:214780 72/177 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583432
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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