DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15539 and p4ha2

DIOPT Version :10

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:561 Identity:168/561 - (29%)
Similarity:269/561 - (47%) Gaps:87/561 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLAILYLLVLVKSHSKPKILENNYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLE 70
            |||.:|.|..:.:       ::.....|...|:.||..|..||..|:::....::|:..::.:..
 Frog     6 ISLILLSLCCIWE-------VQTEVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWAS 63

  Fly    71 MTDYDREKNLAE------DPIKHFRITRRLHSDYVNWVWFMEEQPWGTLVKDIIAIAPE------ 123
            ..|....::.|:      .|:..:::.:|.::|            |.:|...::..:.:      
 Frog    64 EVDELSSRSTADPEGYLGHPVNAYKLVKRFNTD------------WSSLENLVLQDSAKGFIANF 116

  Fly   124 ------MPTLKDVEEAIRGLRLIQWTYSLPTAEMAKGVLQDIHHNTSLDGMQCITIARHMVNYKD 182
                  .||.:|...|.|.|..||.||.|....:|||.|...::.:||.......:.:...:..|
 Frog   117 TFQREYFPTEEDETGAARALMRIQDTYKLDPDVIAKGKLPGTNYISSLSADDSFGMGKIAYHDGD 181

  Fly   183 FIRAKEWLMVGLKMYEADEEIEYIYSQLGMPLVDF--YELFVEIQD-----ELGSRYLAMS-ELQ 239
            :.....|:...||  :.||..:.:.::  :.::|:  |.:| ::.|     ||..|.||:. ...
 Frog   182 YYHTVLWMQQALK--QMDEGEDAVVNK--VDVLDYLSYTVF-QLGDVPRALELTKRLLALDPNHD 241

  Fly   240 LAIKN--WPEKVSLQRALSRLKMNIRIGKEPAEKKN----------KSKRVYKKCCSSE-----C 287
            .|:.|  :.||:. ::..:.||.|.....|.|.::.          ..:.||:..|..|     .
 Frog   242 RAVNNLKYFEKMQ-EKQKAELKQNESTNTESATRQPGVYSRPLDYLPERDVYEALCRGEGVKMNP 305

  Fly   288 RPTAKLYCLYKT-TSSYFLRLAPLKMELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLAR-TVTV 350
            |...:|:|.|.. ..|.:|.|:|:|:|.....|.:|.:.:.:||::|..|:.|.|.|||| ||..
 Frog   306 RRQRRLFCRYHNGNRSPYLILSPVKVEDEWDSPRIVRYLNALSDEEIAKIKELAKPKLARATVRD 370

  Fly   351 SKDG-----NYTEDPDRTTKGTWLVEN-NALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYG 409
            .|.|     ||     |.:|..||.|| :.:|.|::...|.:|...:..|:..||.|||:||.|.
 Frog   371 PKTGVLSVANY-----RVSKSAWLEENDDPVIARVNLRMQAITGLTVDTAELLQVANYGMGGQYE 430

  Fly   410 IHFDFLEDAELDNF-----SDRIATAVFYLSDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKG 469
            .||||....|.|.|     .:|:||.:.|:|||..||||:||..|.:::||||:|:.||||...|
 Frog   431 PHFDFSRKDEPDVFKRLGTGNRVATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSG 495

  Fly   470 DGDNRTAHSACPTVVGSRWVMTKWINEREQIFRRPC-LTSI 509
            :||.||.|:|||.:|||:||..||.:||.|.|.||| ||.:
 Frog   496 EGDYRTRHAACPVLVGSKWVSNKWFHERGQEFLRPCGLTEV 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..158 CDD:462433 31/142 (22%)
P4Hc 329..494 CDD:214780 80/176 (45%)
p4ha2XP_012814344.2 P4Ha_N 26..157 CDD:462433 31/142 (22%)
BepA 166..>247 CDD:443813 16/85 (19%)
TPR repeat 166..201 CDD:276809 6/36 (17%)
TPR repeat 206..236 CDD:276809 8/32 (25%)
P4Hc 348..521 CDD:214780 81/177 (46%)

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