DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15539 and PH4alphaSG2

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster


Alignment Length:533 Identity:152/533 - (28%)
Similarity:251/533 - (47%) Gaps:56/533 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAILYLLVLVKSHSKPKILENNYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLEMT 72
            :.|..|::.|      .:....:..|:..|..|...|..|||..:.:..:.||::|....|:|..
  Fly     9 IGIFQLIIWV------GVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQI 67

  Fly    73 DYDRE---KNLAED-----PIKHFRITRRLHSDYVNWVW--------------FMEEQPWGTLVK 115
            ..:.|   ..|..|     |:..||:.:||..|:.:.::              |:|     .|.:
  Fly    68 KREHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVE-----VLSR 127

  Fly   116 DIIAIAPEMPTLKDVEEAIRGLRLIQWTYSLPTAEMAKGVLQDIHHNTSLDGMQCITIARHMVNY 180
            |:     ..|...:::.||:||..:|..|:|.|:::|.|::..:::.:.|...:|..|...:.:.
  Fly   128 DL-----GYPDQSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDL 187

  Fly   181 KDFIRAKEWLMVG---LKMYEADEEIEYIYSQLGMPLVDFYELFVEIQDELGSRYLAMSELQLAI 242
            .::.|:.|||.|.   |:....:|:....|      |.|..|.......|||:...|...|...:
  Fly   188 GEYQRSLEWLQVAFILLRNSPREEKDADHY------LSDIREYASMANFELGNPKKAARLLSQIL 246

  Fly   243 KNWPEKVSLQRALSRLKMNIRIGKEPAEKKNKSKRVYKKCCSSECRPTAK----LYCLYKTTSSY 303
            ::.|.. |.|:....|:..:. ||...|.|......|.:.|.....|..:    |.|........
  Fly   247 ESQPTH-SAQQTQKYLESRVP-GKNVQETKPSWFSNYTRLCQGRRLPEERSGDPLRCYLDGKRHA 309

  Fly   304 FLRLAPLKMELLSLDPYMVLFHDVVSDKDIVSI-RNLTKGKLARTVTVSKDGNYTEDPDRTTKGT 367
            :..||||::|.:.|||.:.::|.::|.|.|:|| ....|.::.|:......|..|....|.::.|
  Fly   310 YFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQT 374

  Fly   368 WLVENNALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDFLEDAELDNF-SDRIATAV 431
            ||...:.::..:.::.|.::.||:..|:..||.|||:||.|..|.|:.|.....|| .|||:|::
  Fly   375 WLDYKSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFEGDRISTSM 439

  Fly   432 FYLSDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKGDGDNRTAHSACPTVVGSRWVMTKWINE 496
            ||||||.|||.|:|.||.:.:.|.||:.::|:||......|.||.|:.||.:|||:.:...|::.
  Fly   440 FYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHS 504

  Fly   497 REQIFRRPC-LTS 508
            ..|.||||| |||
  Fly   505 GYQEFRRPCNLTS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 36/144 (25%)
P4Hc 329..494 CDD:214780 62/166 (37%)
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 36/144 (25%)
P4Hc 335..503 CDD:214780 63/167 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461784
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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