DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15539 and PH4alphaEFB

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:546 Identity:166/546 - (30%)
Similarity:269/546 - (49%) Gaps:62/546 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAILYLLVLVKSHSKPKILENNYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLEMT 72
            :.:|.:|:||...:..::.     .::.:|.:|::.|..|:..|:.:....:.:::.|:.  :|.
  Fly     8 MLLLGILLLVGGPANGEVY-----TALAEMEELLETESVLITNLEGYIRVQEDKLNFLKN--KMD 65

  Fly    73 DYDREKNLA--------EDPIKHFRITRRLHSDYVNWVWFMEEQPWGTLVKDIIAIAP--EMPTL 127
            :|.||.:.|        .:||..:.:|:||.:|:......||.......:::|.....  :.|:.
  Fly    66 EYQREHSDASHDITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSD 130

  Fly   128 KDVEEAIRGLRLIQWTYSLPTAEMAKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMV 192
            :|:..|...|..:|.||.|.|:.:|:|.|..|.::|.:....|..:.|......|:.....|:..
  Fly   131 EDLNGAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNE 195

  Fly   193 GL-KMYEADEEIEYIYSQLGMPLVDFYELFVEIQDELGSRYLAMSELQLAI---------KNWPE 247
            .: :|.|  |...:..|.....::::.......:..:.|.....:||...:         |.:.|
  Fly   196 AMARMLE--EPTNHTQSFTKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKRFYE 258

  Fly   248 K-VSLQRALSRL----------KMNIRIGK-EPAEKKNKSKRVYKKCCSSECRPT----AKLYCL 296
            | ::.|..|.::          |.::.:.| :||......:|.|:..|..|.:|:    ..|.|.
  Fly   259 KEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGELKPSPSDLRSLRCR 323

  Fly   297 YKTTSSYFLRLAPLKMELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLAR-TVTVSKDG-----N 355
            |.|....||||.|||:|.:..|||:|::||.:.|.:|..|:.:.:.:..| ||..|..|     |
  Fly   324 YVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETAN 388

  Fly   356 YTEDPDRTTKGTWL-VENNALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDFLEDAE 419
            |     |.:|..|| .:.:.:|:.:.|.|.|||..|:..|:..||:||||||.|..||||....|
  Fly   389 Y-----RISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEE 448

  Fly   420 LD-----NFSDRIATAVFYLSDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKGDGDNRTAHSA 479
            ..     |..:||||.:||:|||.|||||:|..|..::|||||:|..|.||...|.||.||.|:|
  Fly   449 QRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAA 513

  Fly   480 CPTVVGSRWVMTKWINEREQIFRRPC 505
            ||.:.|::||..|||:||.|.|||||
  Fly   514 CPVLTGTKWVSNKWIHERGQEFRRPC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 31/132 (23%)
P4Hc 329..494 CDD:214780 75/176 (43%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 31/132 (23%)
P4Hc 356..529 CDD:214780 76/177 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461816
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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