DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15539 and CG18231

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster


Alignment Length:505 Identity:140/505 - (27%)
Similarity:234/505 - (46%) Gaps:103/505 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LENN--YAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLEMTDY-------DREKNLA 81
            :|||  |: ||..:.||::.|...:..::.:.|.|.::|..|:.|::..||       ||||.:.
  Fly    11 VENNSVYS-SITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFEDREKYVG 74

  Fly    82 EDPIKHFRITRRLHSDYVNW------VWFMEEQPWGTLVKDIIAIAPEMPTLKDVEEAIRGLRLI 140
             :||..|.:.||.|.|...|      :..|||.   ..:::|||   ::|..||:..::..:..|
  Fly    75 -NPINAFSLVRRTHQDLPKWHNYSQQIVGMEEL---FALEEIIA---KVPDKKDMAYSLGEMHRI 132

  Fly   141 QWTYSLPTAEMAKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMVGLKMYEADEEIEY 205
            :..|.|...|:|:|.:|...::.......|:.:..|....:|:.||..|..|.:| :|.:...|.
  Fly   133 EQIYDLEAIELARGRIQGKQYDFRPSIRDCVALGEHKFKREDYQRASMWFRVAIK-HEPEGNAEI 196

  Fly   206 IYSQLGMPLVDFYELFVE---------------IQDELGSRYLAMSELQLA-IKNWPEKVSLQRA 254
            |.|.||.|.|:.|.|:.:               |.:.....|.|:::..|| ||:     .|...
  Fly   197 INSILGDPKVNLYTLYAKSMLIFGMIKSNPSMTIAEAKKISYEALNKASLADIKS-----LLNEL 256

  Fly   255 LSR------LKMNIRIGKEPAEKKNKSK-RVYKKCCSSECRPTAKLYCLYKTTSSYFLRLAPLKM 312
            ||:      .:||:          ||:| ..|:..|..:........|.|..|.:.||:|||||.
  Fly   257 LSQTDDEIVYEMNV----------NKTKPSDYEIGCRGQFLRRRNHVCTYNFTITEFLKLAPLKQ 311

  Fly   313 ELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLARTVTVSKDGNYTEDPDRTTKGTWLVENNALIQ 377
            |:|:.|||:|::|||::|.:|..::                 |:..|.|       .||.|.:.:
  Fly   312 EVLNWDPYIVIYHDVLNDDEIDKLK-----------------NHLNDTD-------AVEVNPIEK 352

  Fly   378 RLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDFLEDAELDNFSDRIATAVFYLSDVPQGGA 442
            |:.|...::|......:|. |:::......:....::|:           .|.:|:|::|..|||
  Fly   353 RIFQRINELTRLSFEHSDQ-QIVSKNGPRTHKHKKEYLK-----------GTLLFFLNNVELGGA 405

  Fly   443 TIFPKLGLSVFPKKGSALLWYNLDHKGDGDNRTAHSACPTVVGSRWVMTK 492
            .:||||.:||||:|||.|.|:|     ..|.|:....||.:.|::.|:|:
  Fly   406 MVFPKLKISVFPQKGSCLFWHN-----TLDPRSEPLECPVLQGNKRVITQ 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 39/135 (29%)
P4Hc 329..494 CDD:214780 42/164 (26%)
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 39/135 (29%)
2OG-FeII_Oxy 322..449 CDD:304390 44/167 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461896
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

Return to query results.
Submit another query.