DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15539 and CG18233

DIOPT Version :10

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster


Alignment Length:530 Identity:168/530 - (31%)
Similarity:279/530 - (52%) Gaps:68/530 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLVLVKS-HS-KPKILENN--YAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLE--- 70
            :|:||:| || .|....|.  |:.|:..:.||:..|...:.....:||.||::||.|..:|:   
  Fly    10 VLILVQSIHSTDPNDFLNRKYYSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALK 74

  Fly    71 ----MTDYDREKNLAEDPIKHFRITRRLHSDY---VNWVWFMEEQPWG----TLVKDIIAIAPEM 124
                .|..:||| ...:|:..|.:.|||:.|:   .|:.    ::|.|    |.::||::.|||.
  Fly    75 RPNHKTHNEREK-FVSNPLNAFGLIRRLNQDWPKLQNYT----QKPLGLEQLTAMQDIVSAAPES 134

  Fly   125 PTLKDVEEAIRGLRLIQWTYSLPTAEMAKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEW 189
               .|:.|.::.:..|:.||.|...::|||:||....|..|....|:.:|.|.....:|.|:..|
  Fly   135 ---FDMNEKLKAMHRIETTYDLQPKDIAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLW 196

  Fly   190 LMVGLKMYEADEEIEYIYSQLGMPLVDFYELFVEIQDELGSRYL--------AMSELQLAIKNWP 246
            ....||: ..|..:|.:.....:.|..|.....:....|.::.|        |.|:||.|     
  Fly   197 FQEALKL-STDGSLEIMNRLKEIELKGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDA----- 255

  Fly   247 EKVSLQRAL-SRLK--MNIRIGKEPAEKKNKSKRVYKKCCSSECRPTAKLYCLYKTTSSYFLRLA 308
            :.:.|::.: |.||  :|......|.:.....:.::.|        .:.|.|.|.::::.||:||
  Fly   256 KLMDLEQLISSELKQWINDDSTTPPTDHNLGCRGLFPK--------KSNLVCRYNSSTNAFLKLA 312

  Fly   309 PLKMELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLARTVTVSKDGNYTE--DP-DRTTKGTWLV 370
            |||||.:|.|||:|:||:|:|||||..:    ||:    :|..::| :|.  || :..::..|:.
  Fly   313 PLKMEEISRDPYIVMFHEVISDKDIEEM----KGE----ITEMENG-WTSLGDPKEIVSRVYWIR 368

  Fly   371 ENNALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDF----LEDAELDN-FSDRIATA 430
            :.::..:|::|...|||.|.:.:....|:.|:|:||::..|:||    |::.:::| ..|||.:.
  Fly   369 KESSFSKRINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVNNTLGDRIGSI 433

  Fly   431 VFYLSDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKGDGDNRTAHSACPTVVGSRWVMTKWIN 495
            :||..:|.|||.|:||.|.::|.||||:||.|:|.......|.|:.||.||.:|||||.:|||::
  Fly   434 IFYAGEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLH 498

  Fly   496 EREQIFRRPC 505
            ...|:|.:||
  Fly   499 YAPQLFVKPC 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..158 CDD:462433 41/138 (30%)
P4Hc 329..494 CDD:214780 64/172 (37%)
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433 40/137 (29%)
P4Hc 333..498 CDD:214780 65/173 (38%)

Return to query results.
Submit another query.