DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15539 and CG18234

DIOPT Version :10

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster


Alignment Length:502 Identity:152/502 - (30%)
Similarity:244/502 - (48%) Gaps:50/502 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLEMTDYDRE------KNLAEDPIKH 87
            |.|:||..|.:|:|.|.:.::.::.:..||:.::|.:|..|:.....||      :.....|:..
  Fly    23 NSAMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNA 87

  Fly    88 FRITRRLHSDYVNWVWFMEEQPWGTLVKDI-IAIAPEMPTLKDVEEAIRGLRLIQWTYSLPTAEM 151
            |.:.||||.|:......|..|.....::.| ..:....|:..|:.:||.|:..:|..|:|..:::
  Fly    88 FSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDI 152

  Fly   152 AKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMVGLKMYEADEEIEYIYSQLGMPLVD 216
            |.|:|....:|.||..:.|..:|...:|:.....|..|....:..|..|.:.:.........|.|
  Fly   153 ANGLLMGQQYNASLTTLNCQALANACMNFNYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRLPD 217

  Fly   217 FYELFVEIQDELGSRYLAMSELQLAIKNWPEKVSLQRALSRLKMNI-RIGK----EPA------- 269
            .|..:..:....|.|..|...||       :...|...|..|:.:| .:||    :|.       
  Fly   218 LYINYTSVLVTKGFRKAAWKVLQ-------DVADLDATLWLLRKDIYEVGKIDVPDPTFIITPWF 275

  Fly   270 EKKNKSKRVYKKCCSSECRPTAKLYCLYKTTSSYFLRLAPLKMELLSLDPYMVLFHDVVSDKDIV 334
            :...         |....:.:..|.|.|:..:|.|||:||||:|.|||.|::||:|||:.|.:|.
  Fly   276 DVTG---------CLRVGQTSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEIS 331

  Fly   335 SIRNLTKGKLARTVTVSKDGNYTEDPDRTTKGTWLVENNALIQRLSQLTQDMTNFDIHDADPFQV 399
            .::|::...|...:.:....:|      ..|...:.|::.  ..||...:|||..|:.:...||:
  Fly   332 KVKNISLPSLKSPLRILYAIDY------NLKFAKIREDHQ--SPLSLRIKDMTGEDVQEDTDFQI 388

  Fly   400 LNYGIGGFYGIHFDFLE----DAELDNFSDRIATAVFYLSDVPQGGATIFPKLGLSVFPKKGSAL 460
            .||||.||...|.|.:|    .|||   .||:.:.:|:::||.||||..||.|.|:::|:|||||
  Fly   389 DNYGICGFRNFHTDNIELQDQTAEL---GDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSAL 450

  Fly   461 LWYNLDHKGDGDNRTAHSACPTVVGSRWVMTKWINEREQIFRRPCLT 507
            :|.||||:...:....|.:||.||||:|.:.||::||.|:|.|||.|
  Fly   451 VWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPCTT 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..158 CDD:462433 34/131 (26%)
P4Hc 329..494 CDD:214780 60/168 (36%)
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433 34/131 (26%)
P4Hc <371..485 CDD:214780 52/116 (45%)

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