DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15539 and P4htm

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_217285.7 Gene:P4htm / 301008 RGDID:1311848 Length:503 Species:Rattus norvegicus


Alignment Length:434 Identity:83/434 - (19%)
Similarity:142/434 - (32%) Gaps:160/434 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 IRGLRLIQWTYSLPTAEMAKGVLQD-----IHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMVG 193
            ||.|.|....:.:|      |.|.|     |.|...:.|:|...|.                   
  Rat   136 IRTLSLKPLLFEIP------GFLSDEECRLIIHLAQMKGLQRSQIL------------------- 175

  Fly   194 LKMYEADEEIEYIYSQLGMPLVDFYELFVEIQDELGSRYLAMSELQLAIKNWPEKVSLQRALSRL 258
                 ..||.|...|.:.:..:|.::|..:..|........:::.:|....|....::|...|.:
  Rat   176 -----PTEEYEEAMSAMRVSQLDLFQLLDQNHDGRLQLREVLAQTRLGNGRWMTPENIQEMYSAI 235

  Fly   259 KMNIRIGKEPAEKKNKSKRVYKKCCSSECRPTAKLYCLYKTTSSYFLRLAPLKMELLSLDPYMVL 323
            |.:                                               |....:|||..:   
  Rat   236 KAD-----------------------------------------------PDGDGVLSLQEF--- 250

  Fly   324 FHDVVSDKDIVSIRNLTKGKLARTVTVSKDGNYTEDPDRTTKGTWLVEN-------NALIQRLSQ 381
                 |:.|:.......:...|.:..:.::.::          |||.:.       .|:.||:.:
  Rat   251 -----SNMDLRDFHKYMRSHKAESSELVRNSHH----------TWLHQGEGAHHVMRAIRQRVLR 300

  Fly   382 LTQDMTNFDIHDADPFQVLNYGIGGFYGIHFD---------------FLEDAELDNFSDRIATAV 431
            ||: ::...:..::|.||:.||.||.|..|.|               ...::.....|.|..|.:
  Rat   301 LTR-LSPEIVELSEPLQVVRYGEGGHYHAHVDSGPVYPETVCSHTKLVANESVPFETSCRYMTVL 364

  Fly   432 FYLSDVPQGGATIFP---------------------------KLGLSVFPKKGSALLWYNLDHKG 469
            |||::|..||.|:||                           |..|.|.|::|:|:.|||....|
  Rat   365 FYLNNVTGGGETVFPVADNRTYDEMSLIQDNVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDG 429

  Fly   470 DG-----DNRTAHSACPTVVGSRWVMTKWIN-----EREQIFRR 503
            .|     |:.:.|..|....|::|:...|||     .|:.:|::
  Rat   430 QGWVGEVDDYSLHGGCLVTRGTKWIANNWINVDPSRARQALFQQ 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 6/21 (29%)
P4Hc 329..494 CDD:214780 49/218 (22%)
P4htmXP_217285.7 EF-hand_7 193..253 CDD:404394 13/114 (11%)
P4Hc 247..459 CDD:214780 50/230 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343189
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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