DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15539 and P4ha2

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_006532515.1 Gene:P4ha2 / 18452 MGIID:894286 Length:557 Species:Mus musculus


Alignment Length:576 Identity:168/576 - (29%)
Similarity:262/576 - (45%) Gaps:95/576 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLAILYLLVLVKSHSKPKILENNYAISIYDMSKLIDYEHYLLNILQKFANALQKRV-------D 63
            :.|.:|.|::|:........::..:..||..|:.||..|..|:..|:::....:.::       .
Mouse     1 MKLQVLVLVLLMSWFGVLSWVQAEFFTSIGHMTDLIYAEKDLVQSLKEYILVEEAKLAKIKSWAS 65

  Fly    64 TLEYYLEMTDYDREKNLAEDPIKHFRITRRLHSDYVNWVWFMEEQPWGTLVKDIIAIAPEMPTLK 128
            .:|.....:..|.|..||. |:..:::.:||::|:......:.:......|.::.......||.:
Mouse    66 KMEALTSRSAADPEGYLAH-PVNAYKLVKRLNTDWPALGDLVLQDASAGFVANLSVQRQFFPTDE 129

  Fly   129 DVEEAIRGLRLIQWTYSLPTAEMAKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMVG 193
            |...|.|.|..:|.||.|....:::|.|....:...|....|..:.|...|..|:.....|:...
Mouse   130 DESGAARALMRLQDTYKLDPDTISRGELPGTKYQAMLSVDDCFGLGRSAYNEGDYYHTVLWMEQV 194

  Fly   194 LKMYEADEE-----------IEYIYSQLGMPLVDFYELFVEIQDELGSRYLAMSELQLAIKNWPE 247
            ||..:|.||           :.|...|||    |.:...     ||..|.|::..          
Mouse   195 LKQLDAGEEATVTKSLVLDYLSYAVFQLG----DLHRAV-----ELTRRLLSLDP---------- 240

  Fly   248 KVSLQRALSRLKMNIRIGKEP-------------AEKKNKSKR---------VYKKCCSSE---- 286
              |.:||...|:...|:.:|.             |.::|..:|         ||:..|..|    
Mouse   241 --SHERAGGNLRYFERLLEEERGKSLSNQTDAGLATQENLYERPTDYLPERDVYESLCRGEGVKL 303

  Fly   287 -CRPTAKLYCLYKTTSSY-FLRLAPLKMELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLAR-TV 348
             .|...||:|.|...:.. .|.:||.|.|.....|::|.::||:||::|..|:.:.|.|||| ||
Mouse   304 TPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATV 368

  Fly   349 TVSKDGNYTEDPDRTTKGTWLVE-NNALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHF 412
            ...|.|..|....|.:|.:||.| ::.::.|:::..|.:|...:..|:..||.|||:||.|..||
Mouse   369 RDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHF 433

  Fly   413 DFLE---DAELD----------NFSD------------RIATAVFYLSDVPQGGATIFPKLGLSV 452
            ||..   |:.|.          |:||            |:||.:.|:|||..||||:||.||.::
Mouse   434 DFSRRPFDSGLKTEGNRLATFLNYSDEQDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAI 498

  Fly   453 FPKKGSALLWYNLDHKGDGDNRTAHSACPTVVGSRWVMTKWINEREQIFRRPCLTS 508
            :||||:|:.||||...|:||.||.|:|||.:||.:||..||.:||.|.|.|||.|:
Mouse   499 WPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPCGTT 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 29/129 (22%)
P4Hc 329..494 CDD:214780 78/191 (41%)
P4ha2XP_006532515.1 P4Ha_N 28..157 CDD:369820 29/129 (22%)
P4Hc 348..541 CDD:214780 79/192 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

Return to query results.
Submit another query.