DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15539 and LOC100492280

DIOPT Version :9

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_031761347.1 Gene:LOC100492280 / 100492280 -ID:- Length:552 Species:Xenopus tropicalis


Alignment Length:548 Identity:168/548 - (30%)
Similarity:265/548 - (48%) Gaps:91/548 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NYAISIYDMSKLIDYEHYLLNILQKFANA-------LQKRVDTLEYYLEMTDYDREKNLAEDPIK 86
            ::..||..|:.|::.|..|:..|:.:..|       ::|..|.|::..:....|.|..|.. |:.
 Frog    19 DFFTSIGHMTDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKDPEGFLGH-PVN 82

  Fly    87 HFRITRRLHSDYVNWVWFMEEQPWGTLVKDI-------IAIAPE-MPTLKDVEEAIRGLRLIQWT 143
            .|::.:||::::|.    :|    ..::|||       :.|..: .|..:|...|.:.|..:|.|
 Frog    83 AFKLMKRLNTEWVK----LE----NLILKDISDGFISNLTIQRQYFPNDEDQTGAAKALLRLQDT 139

  Fly   144 YSLPTAEMAKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMVGLKMYEADEEIEYIYS 208
            |:|.|..::||.|..:.|.|||....|..:.:......|:...:.|:...|...:|.||     |
 Frog   140 YNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQALSQLDAGEE-----S 199

  Fly   209 QLGMPLV-DFYELFVEIQDELGSRYLAMSELQLAIKNWPEKVSLQRALSRL--------KMNIRI 264
            .|...:| |:....|..|.:| .:.|.:::|.|.:.  ||.   ||....|        |.:.:.
 Frog   200 SLDKVMVLDYLSYAVYQQGDL-DKALTLTKLLLELD--PEH---QRGNGNLRYFEYIMSKESNKS 258

  Fly   265 GKEPAE------KKNKSK------RVYKKCCSSE-----CRPTAKLYCLY-KTTSSYFLRLAPLK 311
            ...|:|      :|.:.|      :.|:|.|..|     .|...:|:|.| .......|.|:|.|
 Frog   259 SSSPSEGAELGTRKGRPKDHLPERQKYEKLCRGEGVKMTSRRQKRLFCRYFDGNKDPLLILSPTK 323

  Fly   312 MELLSLDPYMVLFHDVVSDKDIVSIRNLTKGKLAR-TVT-------------VSKDGNYTEDPD- 361
            .|.....|.:|.:||::||::|..::.|.|.:|.| |::             :||......||. 
 Frog   324 QEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLETAQYRISKRRATVHDPQT 388

  Fly   362 --------RTTKGTWL-VENNALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDFLED 417
                    |.:|..|| ...:.::.||::..:.:|..|:..|:..||.|||:||.|..||||...
 Frog   389 GKLTTAQYRVSKSAWLSAYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGMGGQYEPHFDFARK 453

  Fly   418 AELDNFSD-----RIATAVFYLSDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKGDGDNRTAH 477
            .|.|.|.:     |:||.:||:|||..||||:||::|.:|:||||:|:.||||...|:||..|.|
 Frog   454 DEPDAFKELGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLFESGEGDYSTRH 518

  Fly   478 SACPTVVGSRWVMTKWINEREQIFRRPC 505
            :|||.:||::||..|||:||.|.|||||
 Frog   519 AACPVLVGNKWVSNKWIHERGQEFRRPC 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..156 CDD:285528 35/137 (26%)
P4Hc 329..494 CDD:214780 74/193 (38%)
LOC100492280XP_031761347.1 P4Ha_N 24..111 CDD:400573 22/95 (23%)
P4Hc 341..536 CDD:214780 75/194 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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