DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15539 and p4ha1b

DIOPT Version :10

Sequence 1:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_068070400.1 Gene:p4ha1b / 100003675 ZFINID:ZDB-GENE-030131-4089 Length:558 Species:Danio rerio


Alignment Length:548 Identity:151/548 - (27%)
Similarity:259/548 - (47%) Gaps:78/548 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NNYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLEYYLEMTD-------YDREKNLAEDPI 85
            |::..|...|:.|:..|..|:..|:::....:.|::.::.:.:..|       .|.|..|.. |:
Zfish    19 NDFFTSTGQMTDLLYAEKDLVTSLKEYIKQEENRLEQVKEWADKLDSLTITATQDPEGFLGH-PV 82

  Fly    86 KHFRITRRLHSDYVNWVWFMEEQPWGTLVKDIIAIAPEMPTLKDVEEAIRGLRLIQWTYSLPTAE 150
            ..|::.:||:|::.:....:.:......:.::.......||.:|...|.:.|..:|.||.|....
Zfish    83 NAFKLMKRLNSEWSDLENLVLKDTTNGFISNLTVQRQYFPTDEDQTGAAKALLRLQDTYQLSANA 147

  Fly   151 MAKGVLQDIHHNTSLDGMQCITIARHMVNYKDFIRAKEWLMVGLKMYEADEE--IEYIYSQLGMP 213
            ::.|.|..:.|.:.:....|..:.:...:..|:...:.|:...|...:..||  |:.:      .
Zfish   148 ISSGDLPGVVHKSRMTVEDCYELGKIAYSDADYYHTELWMAQALSQLDEGEESPIDKV------T 206

  Fly   214 LVDFYELFVEIQDELG------SRYLAMS-----------------ELQLAIKNWPEKVSLQRAL 255
            ::|:....:..|.||.      .|.|.:.                 |.|...:|..::...:|.|
Zfish   207 VMDYLSYAIYQQGELDRALELTKRMLKLDPNHHRANGNLKYFEFQLEKQRKAENEKKEEDQKRVL 271

  Fly   256 SRLKMNIRIGKEPAEKKNKSKRVYKKCCSSE-----CRPTAKLYCLYKTTS-SYFLRLAPLKMEL 314
            .:.....:..|:|..::.|    |::.|..|     .|..::|:|.|...: :..|.|||:|.|.
Zfish   272 DKRDAQRKRSKDPLPERKK----YERLCRGEGIKLTPRRQSRLFCRYSNNNRNPRLLLAPVKQED 332

  Fly   315 LSLDPYMVLFHDVVSDKDIVSIRNLTKGKLAR-TVT-------------VSK---------DGNY 356
            ....|.:|.:|:::||.:|.:::.:.|.:|.| |::             :||         .|..
Zfish   333 EWDRPRIVRYHEIISDSEIETVKEMAKPRLRRATISNPITGVLETAPYRISKRRATVHDPITGKL 397

  Fly   357 TEDPDRTTKGTWLV-ENNALIQRLSQLTQDMTNFDIHDADPFQVLNYGIGGFYGIHFDFLEDAEL 420
            |....|.:|..||. ..::.|:|::|..:|:|..::..|:..||.|||:||.|..||||....|.
Zfish   398 TTAQYRVSKSAWLSGYEHSTIERINQRIEDVTGLEMDTAEELQVANYGVGGQYEPHFDFGRKDEP 462

  Fly   421 DNFSD-----RIATAVFYLSDVPQGGATIFPKLGLSVFPKKGSALLWYNLDHKGDGDNRTAHSAC 480
            |.|.:     ||||.:||:|||..||||:|..:|.:|:||||:|:.||||...|:||..|.|:||
Zfish   463 DAFKELGTGNRIATWLFYMSDVSAGGATVFTDVGAAVWPKKGTAVFWYNLFPSGEGDYSTRHAAC 527

  Fly   481 PTVVGSRWVMTKWINEREQIFRRPCLTS 508
            |.:||::||..|||:||.|.|||||..|
Zfish   528 PVLVGNKWVSNKWIHERGQEFRRPCALS 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15539NP_001036776.1 P4Ha_N 33..158 CDD:462433 27/131 (21%)
P4Hc 329..494 CDD:214780 74/193 (38%)
p4ha1bXP_068070400.1 P4Ha_N 24..155 CDD:462433 27/131 (21%)
TPR repeat 164..199 CDD:276809 4/34 (12%)
BepA <168..264 CDD:443813 15/101 (15%)
TPR repeat 204..234 CDD:276809 6/35 (17%)
P4Hc 347..542 CDD:214780 75/194 (39%)

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