DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaNE1 and Y43F8B.19

DIOPT Version :10

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001123044.2 Gene:Y43F8B.19 / 6418801 WormBaseID:WBGene00077688 Length:243 Species:Caenorhabditis elegans


Alignment Length:210 Identity:61/210 - (29%)
Similarity:94/210 - (44%) Gaps:36/210 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 LKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMH-----RSTVNPLPGGQLKKSAFRVSKNAW 381
            :|:|..:..|.:..:.|:.: ||  |:|:......|     :..||  ..|....|..|.:....
 Worm    22 VKVEVVAWRPGLVIYRDLFT-GK--QVRDHLELMEHLKFEEQLVVN--DDGNDIVSKIRRANGTQ 81

  Fly   382 LAYESHP-------TMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFRDPNHYPAEE 439
            :.:|.||       |...:|.:|...|      .|.:...:|..||||..|.|:..    ||:|:
 Worm    82 VFHEDHPAARSIWDTAKNLLPNLNFKT------AEDILALSYNPGGHYAAHHDYLL----YPSEK 136

  Fly   440 ---------GNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAG 495
                     |||..|.|......|.||||.||.|..||:.:.|:..||:|...:.:::..::|||
 Worm   137 EWDEWMRVNGNRFGTLIMAFGAAESGGATVFPRLGAAVRTKPGDAFFWFNAMGNSEQEDLSEHAG 201

  Fly   496 CPVLKGSKWIGNVWI 510
            ||:.||.|.|..:|:
 Worm   202 CPIYKGQKQISTIWL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..157 CDD:462433
P4Hc 341..511 CDD:214780 57/191 (30%)
Y43F8B.19NP_001123044.2 P4Hc 43..217 CDD:214780 56/188 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.