DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaNE1 and p4ha3

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_021322008.1 Gene:p4ha3 / 563281 ZFINID:ZDB-GENE-041010-4 Length:616 Species:Danio rerio


Alignment Length:542 Identity:160/542 - (29%)
Similarity:260/542 - (47%) Gaps:50/542 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLVGLIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHT 70
            |.:.|..|........:.|:|:..:...:..|:.|...|...:......|:.::...|.:...|.
Zfish     7 LFIVLYLLNMPDESFGEMFTSMLSVNQAVSAERKLIDHLIIYIEHEAQRLEDIKRFFSRVTSLHD 71

  Fly    71 MAASDTENYLTNPVNVYRLMKRLHTDW------SLMEGRVQLMAEEMNFNATREYGLSYPSQEDV 129
            ...::..:.:.||:..::|:|||.::|      :..|..::::.|:.     |....|.|..||:
Zfish    72 GIYNEPSDPIANPIAAFKLVKRLKSEWLNVVHSTEAEENIKVLREDY-----RRMESSLPKLEDL 131

  Fly   130 EGAALALVRLQSTYKLDVAQVAQG----ILNGVKY----GSDM-SWQDCFELGQQLFEMEDYNNT 185
            .|||..|:|||..|.|.|..:.:|    |.:.|.:    .||| |..|||.:|:..:::|||.::
Zfish   132 RGAAHGLMRLQDVYNLHVESLVRGHFQQISDPVDFYKLSVSDMLSGDDCFLVGKVAYDLEDYYHS 196

  Fly   186 KVWLRESMERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPK 250
            .:|..|:: ||.|.|..:|.:       :....:.::..|.|.|:.|:...|..||:.:|..||.
Zfish   197 VLWFEEAV-RLFRGTEWSPEN-------EGTLEDALDHLAFSHFKTGNISHALSLSRELLLHDPM 253

  Fly   251 RIRNWHLGDKGTAPPEDIDDVYLPKHSDSYSLSQEFA-------KYEKVCR---GEVHPIVRQEL 305
            . |..|.   .....|.:.:..||..|...:|.:...       .||::|:   .:........|
Zfish   254 N-RRVHF---NVEKYEKLLNENLPATSSGLTLKRPDGIYLRTRNAYEQLCQTKGSQPKHFENPSL 314

  Fly   306 RCRYSRGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVNPLPGGQLK 370
            .|.|.....|..||.|::.|..||.|||..||..::..:...:|:.|:|.:.||.|  ..|....
Zfish   315 FCDYFTNGSPALFLQPIRREIISLQPYVVLFHGFVTQAEAKNIRKYAMPGLRRSVV--ASGMNQA 377

  Fly   371 KSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDT--TFCEQLQVANYGVGGHYEPHWDFFRDPN 433
            .:.:|:||:|||...:|..:..:.:.:...|||:.  .:.|.|||.|||:|||||||:|.....:
Zfish   378 TAEYRISKSAWLKESAHEVVGKLDQRITLVTGLNVQPPYAEYLQVVNYGIGGHYEPHFDHATSDS 442

  Fly   434 H--YPAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGC 496
            .  |..:.|||:||.:.|||.|:.||:|||.:.:.:|.......|||:|||::...:..|.||||
Zfish   443 SPLYRLKTGNRVATIMIYLSPVQAGGSTAFIYANFSVPVVQNAALFWWNLHKNGQGNVDTLHAGC 507

  Fly   497 PVLKGSKW--IGNVWIHEVTQT 516
            ||:.|:||  ..|...|:||.|
Zfish   508 PVIVGNKWGMFKNKNFHKVTCT 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 32/138 (23%)
P4Hc 341..511 CDD:214780 65/175 (37%)
p4ha3XP_021322008.1 P4Ha_N 27..157 CDD:311993 32/134 (24%)
P4Hc 350..519 CDD:214780 64/170 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583395
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.960

Return to query results.
Submit another query.