DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and p4ha1a

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_009304776.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:541 Species:Danio rerio


Alignment Length:542 Identity:203/542 - (37%)
Similarity:314/542 - (57%) Gaps:48/542 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHTMAAS 74
            ||.||...|..||:|:||..:.|||.||:.|...|:..:.|.::.|:|::.....::.....|..
Zfish    12 LISLLKSSSAHSDFFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAEKLDALTATAVQ 76

  Fly    75 DTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEM------NFNATREYGLSYPSQEDVEGAA 133
            |.|.:|.:|||.::|||||:|:|..:|   .|:.::|      |....|:|   :|:.||..|||
Zfish    77 DPEGFLGHPVNAFKLMKRLNTEWGEVE---DLVLKDMSDGFISNLTIQRQY---FPNDEDQNGAA 135

  Fly   134 LALVRLQSTYKLDVAQVAQGILNGVK----YGSDMSWQDCFELGQQLFEMEDYNNTKVWLRESME 194
            .||:|||.|||||...::.|.|.||.    |.|.::.:||||||:..:...||.:|::|:.::::
Zfish   136 KALLRLQDTYKLDTQTISSGDLPGVNTGLPYKSTLTVEDCFELGKIAYSDADYYHTELWMAQALK 200

  Fly   195 RLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIR------ 253
            :|..         ...|..:..|  .::..:.|::|.|:.:.|.|.::|:|..:|:..|      
Zfish   201 QLDE---------GEESSVEIAT--ALDYLSYSVYQQGELERALEYTKRLLTVEPEHQRALGNLK 254

  Fly   254 --NWHLGDKGTAPPEDIDDVYLPKHSDSYSLSQEF----AKYEKVCRGE---VHPIVRQELRCRY 309
              ::.|..:..|..|........|..::....:|:    .||||:||||   :.|..::.|.|||
Zfish   255 YFDYQLAKQKKAEKEQSTKEESKKEQETSDGKKEYLPEKRKYEKLCRGEGLKMTPRRQKHLFCRY 319

  Fly   310 SRGN-HPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTV-NPLPGGQLKKS 372
            ..|| ||:..:.|:|.|:....|.:..:|:|::..:|.:::|::.||:.|:|: ||:. |.|:.:
Zfish   320 FNGNRHPFYTIGPVKQEDEWDRPRIIRYHEIITEQEIEKIKELSKPRLRRATISNPIT-GVLETA 383

  Fly   373 AFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFR--DPNHY 435
            .:|:||:||||...||.:..:.:.::|.|||:....|:||||||||||.||||:||.|  :|:.:
Zfish   384 HYRISKSAWLAAYEHPVVDRINQRIEDITGLNVKTAEELQVANYGVGGQYEPHFDFGRKDEPDAF 448

  Fly   436 -PAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPVL 499
             ....||||||.:||:|:|..||||.||.:..||||..|..:|||||..|.:.||.|:||.||||
Zfish   449 KELGTGNRIATWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVFWYNLFPSGEGDYSTRHAACPVL 513

  Fly   500 KGSKWIGNVWIHEVTQTFARPC 521
            .|:||:.|.||||..|.|.|||
Zfish   514 VGNKWVSNKWIHERGQEFRRPC 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 49/134 (37%)
P4Hc 341..511 CDD:214780 83/173 (48%)
p4ha1aXP_009304776.1 P4Ha_N 28..157 CDD:285528 49/134 (37%)
TPR repeat 172..207 CDD:276809 11/43 (26%)
TPR repeat 212..242 CDD:276809 8/31 (26%)
Fis1 218..262 CDD:304536 10/43 (23%)
P4Hc 352..525 CDD:214780 83/173 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583427
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.760

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