DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaNE1 and P4HA1

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_000908.2 Gene:P4HA1 / 5033 HGNCID:8546 Length:534 Species:Homo sapiens


Alignment Length:555 Identity:206/555 - (37%)
Similarity:320/555 - (57%) Gaps:69/555 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLLVGLIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEH 69
            :|::|:  ||.|......:|:||..:.||:|||:.|...|:..:.|.:..|:|::.....:::..
Human     5 ILIIGI--LLPQSLAHPGFFTSIGQMTDLIHTEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLT 67

  Fly    70 TMAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEM------NFNATREYGLSYPSQED 128
            :.|..|.|.::.:|||.::|||||:|:||.:|   .|:.::|      |....|:|   :|:.||
Human    68 STATKDPEGFVGHPVNAFKLMKRLNTEWSELE---NLVLKDMSDGFISNLTIQRQY---FPNDED 126

  Fly   129 VEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRESM 193
            ..|||.||:|||.||.||...:::|.|.|||:.|.::.:||||||:..:...||.:|::|:.:::
Human   127 QVGAAKALLRLQDTYNLDTDTISKGNLPGVKHKSFLTAEDCFELGKVAYTEADYYHTELWMEQAL 191

  Fly   194 ERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIR-NWHL 257
            .:|..         ...|..|.|::  ::..:.:::|.||.|.|..|::::|:.||:..| |.:|
Human   192 RQLDE---------GEISTIDKVSV--LDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNL 245

  Fly   258 ---------------------GDKGTAPPED---IDDVYLPKHSDSYSLSQEFAKYEKVCRGE-- 296
                                 .|:.|.|.:.   :|  |||          |..|||.:||||  
Human   246 KYFEYIMAKEKDVNKSASDDQSDQKTTPKKKGVAVD--YLP----------ERQKYEMLCRGEGI 298

  Fly   297 -VHPIVRQELRCRYSRGN-HPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRS 359
             :.|..:::|.|||..|| :|...|||.|.|:....|.:..||||:|..:|..::::|.||:.|:
Human   299 KMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRA 363

  Fly   360 TVNPLPGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEP 424
            ||:....|:|..:.:||||:|||:...:|.:..:...::|.||||.:..|:||||||||||.|||
Human   364 TVHDPETGKLTTAQYRVSKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEP 428

  Fly   425 HWDFFR--DPNHY-PAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLD 486
            |:||.|  :|:.: ....||||||.:||:|:|..||||.||.:..:|.|:.|..:|||||..|.:
Human   429 HFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGE 493

  Fly   487 KDYRTKHAGCPVLKGSKWIGNVWIHEVTQTFARPC 521
            .||.|:||.||||.|:||:.|.|:||..|.|.|||
Human   494 GDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPC 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 48/134 (36%)
P4Hc 341..511 CDD:214780 81/172 (47%)
P4HA1NP_000908.2 P4Ha_N 25..112 CDD:400573 28/89 (31%)
TPR 205..238 10/34 (29%)
P4Hc 345..518 CDD:214780 81/172 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.780

Return to query results.
Submit another query.