DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and p4ha2

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:551 Identity:197/551 - (35%)
Similarity:302/551 - (54%) Gaps:68/551 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHTMAAS 74
            |:.|.....:.::.|:|...:.||:..|:.|.:.|:..:...:..|.:::...|.:::..:.:.:
 Frog    10 LLSLCCIWEVQTEVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRSTA 74

  Fly    75 DTENYLTNPVNVYRLMKRLHTDWSLMEGRV-QLMAEEM--NFNATREYGLSYPSQEDVEGAALAL 136
            |.|.||.:|||.|:|:||.:||||.:|..| |..|:..  ||...|||   :|::||..|||.||
 Frog    75 DPEGYLGHPVNAYKLVKRFNTDWSSLENLVLQDSAKGFIANFTFQREY---FPTEEDETGAARAL 136

  Fly   137 VRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRESMERLRRQTS 201
            :|:|.|||||...:|:|.|.|..|.|.:|..|.|.:|:..:...||.:|.:|::::::::     
 Frog   137 MRIQDTYKLDPDVIAKGKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQALKQM----- 196

  Fly   202 HAPSHLAPTSGPDTVTLNKMEA---TAKSLFQLGDFDTAFELSQRVLQFDP---KRIRNWHLGDK 260
                    ..|.|.| :||::.   .:.::|||||...|.||::|:|..||   :.:.|....:|
 Frog   197 --------DEGEDAV-VNKVDVLDYLSYTVFQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEK 252

  Fly   261 -------------------GTAPP----EDIDDVYLPKHSDSYSLSQEFAKYEKVCRGE---VHP 299
                               .|..|    ..:|  |||:..          .||.:||||   ::|
 Frog   253 MQEKQKAELKQNESTNTESATRQPGVYSRPLD--YLPERD----------VYEALCRGEGVKMNP 305

  Fly   300 IVRQELRCRYSRGNH-PYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVNP 363
            ..::.|.|||..||. ||..|:|:|:|:....|.:..:.:.||..:|::::|:|.|::.|:||..
 Frog   306 RRQRRLFCRYHNGNRSPYLILSPVKVEDEWDSPRIVRYLNALSDEEIAKIKELAKPKLARATVRD 370

  Fly   364 LPGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDF 428
            ...|.|..:.:||||:|||.....|.:..:...::..|||.....|.|||||||:||.||||:||
 Frog   371 PKTGVLSVANYRVSKSAWLEENDDPVIARVNLRMQAITGLTVDTAELLQVANYGMGGQYEPHFDF 435

  Fly   429 FR--DPNHYP-AEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYR 490
            .|  :|:.:. ...|||:||.:.|:|:||.||||.||....|:.|:.|..:|||||.||.:.|||
 Frog   436 SRKDEPDVFKRLGTGNRVATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYR 500

  Fly   491 TKHAGCPVLKGSKWIGNVWIHEVTQTFARPC 521
            |:||.||||.||||:.|.|.||..|.|.|||
 Frog   501 TRHAACPVLVGSKWVSNKWFHERGQEFLRPC 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 49/131 (37%)
P4Hc 341..511 CDD:214780 80/172 (47%)
p4ha2XP_012814344.2 P4Ha_N 27..113 CDD:400573 26/85 (31%)
TPR repeat 166..201 CDD:276809 8/47 (17%)
TPR repeat 206..236 CDD:276809 11/29 (38%)
P4Hc 348..521 CDD:214780 80/172 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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