DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and PH4alphaEFB

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:556 Identity:216/556 - (38%)
Similarity:306/556 - (55%) Gaps:49/556 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVLLVGLIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKE 68
            |:||:| |.||..|....:.::::..:|:||.||..|...|...:...:..|..|::::...::|
  Fly     7 LMLLLG-ILLLVGGPANGEVYTALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQRE 70

  Fly    69 HTMAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEM------NFNATREYGLSYPSQE 127
            |:.|:.|...|::||:|.|.|.|||.|||..:|   .||..::      |....|.. |.:||.|
  Fly    71 HSDASHDITAYVSNPINAYLLTKRLTTDWRQVE---NLMEHDVGTDFLQNITQYRSL-LKFPSDE 131

  Fly   128 DVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRES 192
            |:.|||:||:|||.||:||.:.||:|.|||::|.::||..||||||:|.:...||.:|.:|:.|:
  Fly   132 DLNGAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEA 196

  Fly   193 MER-LRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDP------- 249
            |.| |...|:|..|.         ...:.:|..|.|.::.|:.::|..::..:||..|       
  Fly   197 MARMLEEPTNHTQSF---------TKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANG 252

  Fly   250 -KRIRNWHL----------GDKGT--APPEDIDDVYLPKHSDSYSLSQEFAKYEKVCRGEVHPIV 301
             ||.....:          ||.||  .|..|:.   :.|...:.....|...||.:||||:.|..
  Fly   253 NKRFYEKEIAQQLQLRKMKGDDGTDEMPKSDLP---VAKSDPAIFDMTERRAYEMLCRGELKPSP 314

  Fly   302 R--QELRCRYSRGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVNPL 364
            .  :.|||||.....|:..|.||||||...|||:..:||.:...:|..::.||.||..|:||...
  Fly   315 SDLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNS 379

  Fly   365 PGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFF 429
            ..|.|:.:.:|:||:|||..:....:..:::...|.||||....|:|||.|||:|||||||:||.
  Fly   380 VTGALETANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFA 444

  Fly   430 RDPNHYPAEE---GNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRT 491
            |.......|.   ||||||.:||:|:|||||||.|..|..|:.|:.|...||.||||....|.||
  Fly   445 RKEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRT 509

  Fly   492 KHAGCPVLKGSKWIGNVWIHEVTQTFARPCDVFRDH 527
            :||.||||.|:||:.|.||||..|.|.||||:..||
  Fly   510 RHAACPVLTGTKWVSNKWIHERGQEFRRPCDLEEDH 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 50/134 (37%)
P4Hc 341..511 CDD:214780 80/172 (47%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 50/134 (37%)
P4Hc 356..529 CDD:214780 80/172 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461744
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.850

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