DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and CG18234

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster


Alignment Length:537 Identity:136/537 - (25%)
Similarity:248/537 - (46%) Gaps:76/537 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHTMAASDTENYLTNPVNVYRLM 90
            ||.|:::|:..|.:...|:.|...|::..:..:||.|..::.:..::..:.|.::.:|:|.:.|:
  Fly    27 SIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLI 91

  Fly    91 KRLHTDWSLMEGRVQLMAEEMNFNATR--EYGL--SYPSQEDVEGAALALVRLQSTYKLDVAQVA 151
            :|||.||:..|   .||..::.....:  |.||  :.||..|:..|...::.||..|.|..:.:|
  Fly    92 RRLHEDWTQAE---LLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDIA 153

  Fly   152 QGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKV---WLRESMERLR-RQTSHAPSHLAPTSG 212
            .|:|.|.:|.:.::..:|..|.....   ::|..|.   |.:.:::... .:.......:.....
  Fly   154 NGLLMGQQYNASLTTLNCQALANACM---NFNYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRL 215

  Fly   213 PD--------TVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIRNWHLGDKGTAPPEDID 269
            ||        .||....:|..|.|..:.|.|....|.::.: ::..:|              |:.
  Fly   216 PDLYINYTSVLVTKGFRKAAWKVLQDVADLDATLWLLRKDI-YEVGKI--------------DVP 265

  Fly   270 DVYLPKHSDSYSLSQEFAKYEKVCRGEVHPIVR-----QELRCRYSRGNHPYRFLAPLKLEEHSL 329
            |       .::.::..|         :|...:|     |.|.|.|.:....:..:||||:|..||
  Fly   266 D-------PTFIITPWF---------DVTGCLRVGQTSQHLSCHYEKNTSEFLRIAPLKVETLSL 314

  Fly   330 DPYVATFHDILSPGKISQLREMAVPRMHRSTVNPLPGGQLKKSAFRVSKNAWLA--YESHPTMVG 392
            .|::..:||::...:||:::.:::|    |..:||      :..:.:..|...|  .|.|.:.:.
  Fly   315 KPHIVLYHDVIYDSEISKVKNISLP----SLKSPL------RILYAIDYNLKFAKIREDHQSPLS 369

  Fly   393 MLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFRDPNHYPAEEGNRIATAIFYLSEVEQGG 457
            :  .:||.||.|.......|:.|||:.|....|.|.. :.....||.|:|:.:.:|::::|.|||
  Fly   370 L--RIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNI-ELQDQTAELGDRLTSIMFFMNDVAQGG 431

  Fly   458 ATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPVLKGSKWIGNVWIHEVTQTFARPCD 522
            |.|||.|::.:.||.|:.|.|.||...:..:....|..|||:.||||....|:||..|.|:|||.
  Fly   432 ALAFPNLNLTIWPQKGSALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPCT 496

  Fly   523 V---FRDHEVSLEYEII 536
            .   |:.|:.|:::..:
  Fly   497 TGRKFKSHDQSMKFRAL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 36/132 (27%)
P4Hc 341..511 CDD:214780 52/171 (30%)
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 36/132 (27%)
P4Hc <371..485 CDD:214780 42/114 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461941
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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