DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and p4ha2

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:550 Identity:204/550 - (37%)
Similarity:316/550 - (57%) Gaps:56/550 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIFLLAQGSLAS----DYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHT 70
            |:|||:..|.:|    :.|:||..:.:|:.||:.|.:.|:..:.|.:..|:.:.|..:.::|...
Zfish     5 LVFLLSTLSFSSPTRAEIFTSIGQMTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKLDKLTR 69

  Fly    71 MAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEE---MNFNATREYGLSYPSQEDVEGA 132
            .:.||.|.:|.:|||.|:|||||:|:||.:|..|.....:   .|.:..|:|   :|.:||.:||
Zfish    70 TSTSDPEGFLAHPVNAYKLMKRLNTEWSELESLVLQDPSDGFISNMSVHRQY---FPDEEDEKGA 131

  Fly   133 ALALVRLQSTYKLDVAQVAQGIL------NGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRE 191
            |.||:|||.|||||....::|.|      :||:|.:.::..|||::|:..:...||.::.:|:::
Zfish   132 AKALLRLQDTYKLDAESFSKGKLPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVLWMQQ 196

  Fly   192 SMERLRRQTSHAPSHLAPTSGPDTVT--LNKMEATAKSLFQLGDFDTAFELSQRVLQFDP----- 249
            |:.::             .||.:..|  .:.::..:.|::|:||...|.||::|:|..||     
Zfish   197 SLRQM-------------DSGEEAKTPKADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQRA 248

  Fly   250 -------KRIRNWHLGDKGTAPPEDIDDVYLPKHSDSYSLSQEF----AKYEKVCRGE-VHPIVR 302
                   :|:.:..|.|.|...||..|:  .|...|:|...:::    ..||.:|||| |....:
Zfish   249 GGNLRYFERLLSKELQDSGQTQPEPADE--RPIQLDTYQRPKDYLPEREAYEALCRGEGVKMTTK 311

  Fly   303 QELR--CRYSRGN-HPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVNPL 364
            ::.|  |||..|| :|...|.|:|.|:....|::..|.:.||..:|.:::|:|.|::.|:||...
Zfish   312 RQSRLFCRYRDGNRNPRLLLKPMKEEDEWDSPHIVRFLEALSDEEIQKIKEIATPKLARATVRDP 376

  Fly   365 PGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFF 429
            ..|.|..:.:||||:|||..|..|.:..:.:.::|.|||.....|.||||||||||.||||:||.
Zfish   377 KTGVLTVAHYRVSKSAWLEGEDDPVIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPHFDFS 441

  Fly   430 R--DPNHYPA-EEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRT 491
            |  :|:.:.: ..|||:||.:.|:|:||.||||.||....:|.|:.|..:|||||.||.:.||||
Zfish   442 RKDEPDAFKSLGTGNRVATYLNYMSDVEAGGATVFPDFGASVWPRKGTAVFWYNLFRSGEGDYRT 506

  Fly   492 KHAGCPVLKGSKWIGNVWIHEVTQTFARPC 521
            :||.||||.||||:.|.||||..|.|.|||
Zfish   507 RHAACPVLVGSKWVSNKWIHERGQEFRRPC 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 49/131 (37%)
P4Hc 341..511 CDD:214780 83/172 (48%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 49/131 (37%)
P4Hc 353..526 CDD:214780 83/172 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.830

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