DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and P4htm

DIOPT Version :10

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001386206.1 Gene:P4htm / 301008 RGDID:1311848 Length:503 Species:Rattus norvegicus


Alignment Length:432 Identity:104/432 - (24%)
Similarity:150/432 - (34%) Gaps:161/432 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LNGVKYGSD-----MSWQDCF----ELGQQLFEMEDYNNTK-----VWLRESMERLRRQTSHAPS 205
            |.|:|.|.:     ::.:|.|    .|...|||:..:.:.:     :.|.: |:.|:|      |
  Rat   115 LEGIKVGYERKVQVVAGRDHFIRTLSLKPLLFEIPGFLSDEECRLIIHLAQ-MKGLQR------S 172

  Fly   206 HLAPTSGPDTVTLNKMEATAKSLFQLGD--FDTAFELSQRVLQFDPKRIRNWHLGDKGTAPPEDI 268
            .:.||...:. .::.|..:...||||.|  .|...:|.:.:.|        ..||:.....||:|
  Rat   173 QILPTEEYEE-AMSAMRVSQLDLFQLLDQNHDGRLQLREVLAQ--------TRLGNGRWMTPENI 228

  Fly   269 DDVYL-----PKHSDSYSLSQEFAKYEKVCRGEVHPIVRQELRCRYSRGNHPYRFLAPLKLEEHS 328
            .::|.     |......|| |||:              ..:||                      
  Rat   229 QEMYSAIKADPDGDGVLSL-QEFS--------------NMDLR---------------------- 256

  Fly   329 LDPYVATFHDILSPGKISQLREMAVPRMHRSTVNPLPGGQLKKSAFRVSKNAWL--AYESHPTMV 391
                  .||..:              |.|::..:.|         .|.|.:.||  ...:|..|.
  Rat   257 ------DFHKYM--------------RSHKAESSEL---------VRNSHHTWLHQGEGAHHVMR 292

  Fly   392 GMLRDLKDATGLD---TTFCEQLQVANYGVGGHYEPHWDFFRDP-------NH--------YPAE 438
            .:.:.:...|.|.   ....|.|||..||.||||..|.|  ..|       :|        .|.|
  Rat   293 AIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVD--SGPVYPETVCSHTKLVANESVPFE 355

  Fly   439 EGNRIATAIFYLSEVEQGGATAFPFLD---------------------------IAVKPQLGNVL 476
            ...|..|.:|||:.|..||.|.||..|                           :.||||.|..:
  Rat   356 TSCRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLIQDNVDLRDTRRHCDKGNLRVKPQQGTAV 420

  Fly   477 FWYNL-------HRSLDKDYRTKHAGCPVLKGSKWIGNVWIH 511
            ||||.       ...:| || :.|.||.|.:|:|||.|.||:
  Rat   421 FWYNYLPDGQGWVGEVD-DY-SLHGGCLVTRGTKWIANNWIN 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..157 CDD:462433 1/1 (100%)
P4Hc 341..511 CDD:214780 61/223 (27%)
P4htmNP_001386206.1 EF-hand_7 193..253 CDD:463900 20/82 (24%)
P4Hc 247..459 CDD:214780 68/281 (24%)

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