DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and P4ha1

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001303300.1 Gene:P4ha1 / 18451 MGIID:97463 Length:534 Species:Mus musculus


Alignment Length:556 Identity:205/556 - (36%)
Similarity:317/556 - (57%) Gaps:69/556 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVLLVGLIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKE 68
            :||::.:  ||.|......:|:||..:.||:|.|:.|...|:..:.|.:..|:|::.....:::.
Mouse     4 VVLMMAI--LLPQSLAHPGFFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRL 66

  Fly    69 HTMAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEM------NFNATREYGLSYPSQE 127
            .:.|..|.|.::.:|||.::|||||:|:||.:|   .|:.::|      |....|:|   :|:.|
Mouse    67 TSTATKDPEGFVGHPVNAFKLMKRLNTEWSELE---NLILKDMSDGFISNLTIQRQY---FPNDE 125

  Fly   128 DVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRES 192
            |..|||.||.|||.||.||...:::|.|.||::.|.::.:||||||:..:...||.:|::|:.::
Mouse   126 DQVGAAKALFRLQDTYNLDTNTISKGNLPGVQHKSFLTAEDCFELGKVAYTEADYYHTELWMEQA 190

  Fly   193 MERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIR-NWH 256
            :.:|..         ...|..|.|::  ::..:.:::|.||.|.|..|::::|:.||:..| |.:
Mouse   191 LTQLEE---------GELSTVDKVSV--LDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGN 244

  Fly   257 L---------------------GDKGTAPPED---IDDVYLPKHSDSYSLSQEFAKYEKVCRGE- 296
            |                     .|:.|||.:.   :|  |||          |..|||.:|||| 
Mouse   245 LVYFEYIMSKEKDANKSASGDQSDQKTAPKKKGIAVD--YLP----------ERQKYEMLCRGEG 297

  Fly   297 --VHPIVRQELRCRYSRGN-HPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHR 358
              :.|..::.|.|||..|| :|...|||.|.|:....|.:..||||:|..:|..::::|.||:.|
Mouse   298 IKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSR 362

  Fly   359 STVNPLPGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYE 423
            :||:....|:|..:.:||||:|||:....|.:..:...::|.||||.:..|:||||||||||.||
Mouse   363 ATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYE 427

  Fly   424 PHWDFFR--DPNHY-PAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSL 485
            ||:||.|  :|:.: ....||||||.:||:|:|..||||.||.:..:|.|:.|..:|||||..|.
Mouse   428 PHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASG 492

  Fly   486 DKDYRTKHAGCPVLKGSKWIGNVWIHEVTQTFARPC 521
            :.||.|:||.||||.|:||:.|.|:||..|.|.|||
Mouse   493 EGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPC 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 47/134 (35%)
P4Hc 341..511 CDD:214780 81/172 (47%)
P4ha1NP_001303300.1 P4Ha_N 24..153 CDD:285528 47/134 (35%)
TPR 205..238 10/34 (29%)
P4Hc 345..518 CDD:214780 81/172 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.780

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