DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaNE1 and phy-2

DIOPT Version :10

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:554 Identity:189/554 - (34%)
Similarity:291/554 - (52%) Gaps:56/554 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLLVGLIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEH 69
            ||||.|:..||.    :|.|::|..|:.:|..|:.:|..:...:.|.:..|..|..........:
 Worm     4 VLLVCLLAGLAH----ADLFTAIADLQHMLGAEKDVTTIIDQYIEAERARLDDLRRYAHEYVHRN 64

  Fly    70 TMAASDTENYLTNPVNVYRLMKRLHTDWS-----LMEGRVQLMAEEMNFNATREYGLSYPSQEDV 129
            ..|.|....::|||:|.|.|:|||.|:|.     ::..:.....:.:..|..|. .:.:|.:||:
 Worm    65 AHAESVGPEFVTNPINAYLLIKRLTTEWKKVENIMLNNKASTFLKNITDNRVRS-EVKFPGEEDL 128

  Fly   130 EGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRESME 194
            .|||.||:|||.||.||...::.||:.|.|..:.:|..|.||:|:..:..:||.:..:|::.::.
 Worm   129 SGAATALLRLQDTYSLDTLDLSNGIIGGEKVSNKLSGHDTFEVGRSAYNQKDYYHCLMWMQVALV 193

  Fly   195 RLRRQTSHAPSHLAPTSGPDTV-TLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIR----- 253
            ::..:            .|.|: ....:|..|.||:|.|:...|..|::|:.:..|...|     
 Worm   194 KIENE------------NPPTIEEWEILEYLAYSLYQQGNVRRALSLTKRLAKIAPNHPRAKGNV 246

  Fly   254 NWH---LGDK---GTAPPEDIDDVYLPKHSDSYSLSQEFAKYEKVCRGEVHPIV---RQELRCRY 309
            .|:   |..|   |..||       :......|....|...||.:||||:.|:.   :.:||| |
 Worm   247 KWYEDMLQGKDMVGDLPP-------IVNKRVEYDGIVERDAYEALCRGEIPPVEPKWKNKLRC-Y 303

  Fly   310 SRGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVNPLPGGQLKKSAF 374
            .:.:.|:..|||:|:|....||....|.:::...:|..::|:|.|::.|:||.....|:|:.:.:
 Worm   304 LKRDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATY 368

  Fly   375 RVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFR--DPNHYPA 437
            |:||:|||..:..|.:..:.|.::|.|.|:....|:|||||||:||||:||:||.|  :.|.:..
 Worm   369 RISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKT 433

  Fly   438 -EEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPVLKG 501
             ..||||||.:||:|:.|:||||.|..|..||.|...:.||||||.|..:.|.||:||.||||.|
 Worm   434 LNTGNRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLG 498

  Fly   502 SKWIGNVWIHEVTQTFARPCDVFRDHEVSLEYEI 535
            .||:.|.||||..|.|.|||        .||.|:
 Worm   499 VKWVSNKWIHEKGQEFTRPC--------GLEEEV 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..157 CDD:462433 40/135 (30%)
P4Hc 341..511 CDD:214780 78/172 (45%)
phy-2NP_502317.1 P4Ha_N 21..156 CDD:462433 40/135 (30%)
P4Hc 335..508 CDD:214780 78/172 (45%)

Return to query results.
Submit another query.