DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and LOC110438585

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_021326960.1 Gene:LOC110438585 / 110438585 -ID:- Length:441 Species:Danio rerio


Alignment Length:488 Identity:153/488 - (31%)
Similarity:237/488 - (48%) Gaps:77/488 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LSSIEKEHTMAASDTEN---YLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEMNFNATRE--YGL 121
            |.|....|..:..:.||   .|.:||..|:|:.||..:...:...:|.:.:....:..::  ...
Zfish     5 LHSSVLNHLFSYYEDENPEENLRDPVAAYKLLCRLREELIYIIETIQSIIDVSQCDEFQDELKTT 69

  Fly   122 SYPSQEDVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQ------DCFELGQQLFEME 180
            ..|..||::|||..|:|||..|||              |..|::.:      :.|.:|:..::..
Zfish    70 LIPQYEDLDGAASGLIRLQEIYKL--------------YPEDITKETSLDADEAFHVGRVAYKEY 120

  Fly   181 DYNNTKVWLRESMERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVL 245
            .:.:..:|...|..|....:|        |:..|  .|:.:..:||   ..|....|...||.:|
Zfish   121 KFQHAFLWFSYSGIRWTENSS--------TNEKD--LLHYLSLSAK---HFGSLPWAIYYSQELL 172

  Fly   246 QFDP---------KRIRNWHLGDKGTAPPEDIDDVYLPKHSDSYSLSQEFAKYEKVCRGEVHPIV 301
            ..:|         .|:.::.     .:|..:|           :.|....:.||.:|||||....
Zfish   173 YLNPYDNEVKLQLNRLLHFQ-----KSPNPNI-----------FRLDSLSSNYEALCRGEVDERT 221

  Fly   302 ---RQELRCRYS-RGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVN 362
               ::.|.|||| .|.:|....||:|.||...:|.:..|||::|..:|..|:::|.|::.||.| 
Zfish   222 SKRQRALSCRYSTSGGNPRLMYAPVKEEELWDEPKIIRFHDVISDTEIETLKDIARPQLSRSGV- 285

  Fly   363 PLPGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWD 427
             ...||.|.|..|||::.:|. :..|....:.:.::|.|||.....|.|.|.|||:||.:|||.|
Zfish   286 -YQDGQGKISKHRVSQSVFLD-DDDPVDAHVSQRIEDVTGLSMEKAEPLLVQNYGIGGRFEPHID 348

  Fly   428 FFRDPNHYPAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTK 492
            ..       .||.:||||.:.|:|:||:||||.|..:.|||||:.|:.:|||||.::.:.|:.||
Zfish   349 AL-------GEENDRIATFLIYMSDVEEGGATVFIKVGIAVKPEKGSAVFWYNLQKNGESDFNTK 406

  Fly   493 HAGCPVLKGSKWIGNVWIHEVTQTFARPCDVFR 525
            |||||||:|:||:.|.||.|..|.|.|||.:.:
Zfish   407 HAGCPVLQGNKWVANKWIAEFGQVFRRPCSLHK 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 26/97 (27%)
P4Hc 341..511 CDD:214780 74/169 (44%)
LOC110438585XP_021326960.1 P4Ha_N <19..100 CDD:311993 25/94 (27%)
P4Hc 265..424 CDD:214780 73/168 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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