DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE1 and p4ha1b

DIOPT Version :9

Sequence 1:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_999856.1 Gene:p4ha1b / 100003675 ZFINID:ZDB-GENE-030131-4089 Length:536 Species:Danio rerio


Alignment Length:542 Identity:200/542 - (36%)
Similarity:305/542 - (56%) Gaps:57/542 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHTMAASDT 76
            ||.|.    :|:|:|...:.|||:.|:.|...|:..:...:..|:|::.....::.....|..|.
Zfish    14 FLYAH----NDFFTSTGQMTDLLYAEKDLVTSLKEYIKQEENRLEQVKEWADKLDSLTITATQDP 74

  Fly    77 ENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEE------MNFNATREYGLSYPSQEDVEGAALA 135
            |.:|.:|||.::|||||:::||.:|   .|:.::      .|....|:|   :|:.||..|||.|
Zfish    75 EGFLGHPVNAFKLMKRLNSEWSDLE---NLVLKDTTNGFISNLTVQRQY---FPTDEDQTGAAKA 133

  Fly   136 LVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRESMERLRRQT 200
            |:|||.||:|....::.|.|.||.:.|.|:.:||:|||:..:...||.:|::|:.:::.:|..  
Zfish   134 LLRLQDTYQLSANAISSGDLPGVVHKSRMTVEDCYELGKIAYSDADYYHTELWMAQALSQLDE-- 196

  Fly   201 SHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIR--------NWHL 257
                   ...|..|.||:  |:..:.:::|.|:.|.|.||::|:|:.||...|        .:.|
Zfish   197 -------GEESPIDKVTV--MDYLSYAIYQQGELDRALELTKRMLKLDPNHHRANGNLKYFEFQL 252

  Fly   258 GDKGTAPPE----------DIDDVYLPKHSDSYSLSQEFAKYEKVCRGE---VHPIVRQELRCRY 309
            ..:..|..|          |..|....:..|..   .|..|||::||||   :.|..:..|.|||
Zfish   253 EKQRKAENEKKEEDQKRVLDKRDAQRKRSKDPL---PERKKYERLCRGEGIKLTPRRQSRLFCRY 314

  Fly   310 SRGN-HPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTV-NPLPGGQLKKS 372
            |..| :|...|||:|.|:....|.:..:|:|:|..:|..::|||.||:.|:|: ||:. |.|:.:
Zfish   315 SNNNRNPRLLLAPVKQEDEWDRPRIVRYHEIISDSEIETVKEMAKPRLRRATISNPIT-GVLETA 378

  Fly   373 AFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFR--DPNHY 435
            .:|:||:|||:...|.|:..:.:.::|.|||:....|:||||||||||.||||:||.|  :|:.:
Zfish   379 PYRISKSAWLSGYEHSTIERINQRIEDVTGLEMDTAEELQVANYGVGGQYEPHFDFGRKDEPDAF 443

  Fly   436 -PAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPVL 499
             ....||||||.:||:|:|..||||.|..:..||.|:.|..:|||||..|.:.||.|:||.||||
Zfish   444 KELGTGNRIATWLFYMSDVSAGGATVFTDVGAAVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVL 508

  Fly   500 KGSKWIGNVWIHEVTQTFARPC 521
            .|:||:.|.||||..|.|.|||
Zfish   509 VGNKWVSNKWIHERGQEFRRPC 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 43/134 (32%)
P4Hc 341..511 CDD:214780 83/173 (48%)
p4ha1bNP_999856.1 P4Ha_N 24..153 CDD:285528 43/134 (32%)
TPR repeat 164..199 CDD:276809 10/43 (23%)
TPR_16 168..238 CDD:290168 23/80 (29%)
TPR repeat 204..234 CDD:276809 11/31 (35%)
P4Hc 347..520 CDD:214780 83/173 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.830

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