DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and AT5G18900

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_197391.1 Gene:AT5G18900 / 832008 AraportID:AT5G18900 Length:298 Species:Arabidopsis thaliana


Alignment Length:222 Identity:61/222 - (27%)
Similarity:98/222 - (44%) Gaps:25/222 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 PFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQGASFNY 380
            |.|::::...|........:...:.|.:...|:..:|||.|.. ..:|.|..:..|||.|...:.
plant    34 PSKVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVAD-NDSGESKFSEVRTSSGTFISK 97

  Fly   381 SRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDLHGNRMATGI 445
            .::.....:...:..::.|..:..||:||..|..|..|:.|:|.|.:......|   |:||||.:
plant    98 GKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRG---GHRMATIL 159

  Fly   446 YYLADVEAGGGTAFP--FLP-------------------LLVTPERGSLLFWYNLHPSGDQDFRT 489
            .||::|..||.|.||  .:|                   :.|.|.:|..|.::||||....|..:
plant   160 MYLSNVTKGGETVFPDAEIPSRRVLSENKEDLSDCAKRGIAVKPRKGDALLFFNLHPDAIPDPLS 224

  Fly   490 KHAACPVLQGSKWIANVWIRERNQDNV 516
            .|..|||::|.||.|..||...:.|.:
plant   225 LHGGCPVIEGEKWSATKWIHVDSFDRI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528
P4Hc 336..509 CDD:214780 56/193 (29%)
AT5G18900NP_197391.1 PLN00052 33..298 CDD:177683 61/222 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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