DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and AT4G35810

DIOPT Version :10

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_195306.2 Gene:AT4G35810 / 829735 AraportID:AT4G35810 Length:290 Species:Arabidopsis thaliana


Alignment Length:216 Identity:65/216 - (30%)
Similarity:104/216 - (48%) Gaps:27/216 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 LEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQGASFNYSRN 383
            ||.:..:|.....|..:.:::.:.|...|:|.:.:|.|..: ..|.|..:..|||.|...|...:
plant    80 LEVISWEPRAFVYHNFLTNEECEHLISLAKPSMMKSKVVDV-KTGKSIDSRVRTSSGTFLNRGHD 143

  Fly   384 AATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDLHGNRMATGIYYL 448
            ...:.:...:.||:.:..:..|.|||.:|.:|..||||.|.|.:....::|   |.|:||.:.||
plant   144 EIVEEIENRISDFTFIPPENGEGLQVLHYEVGQRYEPHHDYFFDEFNVRKG---GQRIATVLMYL 205

  Fly   449 ADVEAGGGTAFPF-------LP------------LLVTP-ERGSLLFWYNLHPSGDQDFRTKHAA 493
            :||:.||.|.||.       :|            |.|.| :|.:|||| ::.|....|..:.|..
plant   206 SDVDEGGETVFPAAKGNVSDVPWWDELSQCGKEGLSVLPKKRDALLFW-SMKPDASLDPSSLHGG 269

  Fly   494 CPVLQGSKWIANVW--IRERN 512
            |||::|:||.:..|  :.|.|
plant   270 CPVIKGNKWSSTKWFHVHEYN 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..158 CDD:462433
P4Hc 336..509 CDD:214780 59/194 (30%)
AT4G35810NP_195306.2 PLN00052 75..289 CDD:177683 63/213 (30%)
Blue background indicates that the domain is not in the aligned region.

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