DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and p4htmb

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_001340234.2 Gene:p4htmb / 799930 ZFINID:ZDB-GENE-110131-7 Length:510 Species:Danio rerio


Alignment Length:433 Identity:104/433 - (24%)
Similarity:150/433 - (34%) Gaps:157/433 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 SASLDFMEAVVEYHREMGA--------------------------HESALSLVN------HVLSI 238
            ||:.||..:....|:..||                          |...:|||:      ..||:
Zfish    89 SANRDFTSSDSSSHKVTGASDAQATADSGFPRNMFLPRIEGIRVGHVQKVSLVSGKVHEMKTLSL 153

  Fly   239 EPDQRSHLLEARQQLEELITDGDKNGLLHLTARRPGDYHESREFRMYEQVCRGELAPLPSKQRNL 303
            :|    .|.|....|.|     ::..::...|:..|        .|..||.      :|..|..|
Zfish   154 KP----LLFEIPDFLSE-----EECAVVVRLAQLKG--------LMESQVM------VPEGQEEL 195

  Fly   304 RCRLRKSRLGYAP---FKLEELHLDPLVVQLHQVI-GSKDSDSLQKTARPRIKRSTVY-----SL 359
                 ..:|..:|   |...:|:.|. .:|.|::: .|:..|.:..|:. .:|.  :|     .|
Zfish   196 -----DQQLNLSPEEIFNFLDLNQDG-QLQPHEILTHSRVRDGIWLTSE-NLKE--IYDGLKADL 251

  Fly   360 GGNGGSTAAAF---RTSQGASFNYSRNAATKLL---SRHVGDFSGLN------------------ 400
            .|||..:...|   |:.....|...|......|   |||...:.|..                  
Zfish   252 DGNGLLSLEEFGRLRSDAFQRFLLQRGVERSQLVRNSRHTWLYQGQGAHQVLQDLRKRVTLLTRL 316

  Fly   401 ----MDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDLHGNRMA--------------TGIYY 447
                ::.:|.|||..|..||||..|.||.|   :|.|......|:|              |.::|
Zfish   317 PSSLVELSEPLQVVRYEQGGHYHAHHDSGP---VYPETACTHTRLAANTTSPFQTSCRYITVLFY 378

  Fly   448 LADVEAGGGTAFPFLP---------------------------LLVTPERGSLLFWYNLHPS--- 482
            |.:|:.||.|.||...                           |.|.|.:|:.:||||....   
Zfish   379 LNNVQEGGETTFPVADNRTYEEASLIQNDVDLLDTRKHCDKGNLRVKPVKGTAVFWYNYLSDGRG 443

  Fly   483 --GDQDFRTKHAACPVLQGSKWIANVWIRERNQDNVRPCDLER 523
              |:||..:.|..|.|.||:||:||.||      ||.| |.:|
Zfish   444 WVGEQDEYSLHGGCVVTQGTKWVANNWI------NVDP-DYQR 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528
P4Hc 336..509 CDD:214780 65/251 (26%)
p4htmbXP_001340234.2 EF-hand_7 204..262 CDD:290234 14/61 (23%)
EFh 204..262 CDD:298682 14/61 (23%)
P4Hc 285..471 CDD:214780 50/188 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583463
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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