DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaMP and p4ha1a

DIOPT Version :10

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_073773811.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:603 Species:Danio rerio


Alignment Length:559 Identity:187/559 - (33%)
Similarity:302/559 - (54%) Gaps:75/559 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FLVLQVL---SCHGEFFSSTSGLAKLFETEVVLLAELQNYV-------NEINQHAEALQSEIDAI 63
            ||::.:|   |.|.:||:|...:..|..||..|:..|::|:       .::.|.||    ::||:
Zfish    72 FLLISLLKSSSAHSDFFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAE----KLDAL 132

  Fly    64 RVEHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQD 128
            ....:...:|   :|.:|||||:|:|||:::|...|..|..|.| ..::..:...::  .||:.:
Zfish   133 TATAVQDPEG---FLGHPVNAFKLMKRLNTEWGEVEDLVLKDMS-DGFISNLTIQRQ--YFPNDE 191

  Fly   129 DFVGSAIALTRLQQTYQLDVAELASGILNGVK----YGTAMSWQDCFVLGQHLYALRDYNHTVPW 189
            |..|:|.||.|||.||:||...::||.|.||.    |.:.::.:|||.||:..|:..||.||..|
Zfish   192 DQNGAAKALLRLQDTYKLDTQTISSGDLPGVNTGLPYKSTLTVEDCFELGKIAYSDADYYHTELW 256

  Fly   190 LQQSMQLL--GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPD----------- 241
            :.|:::.|  ||:|....:.:||::...|   .:.|..|.||.....:|::||:           
Zfish   257 MAQALKQLDEGEESSVEIATALDYLSYSV---YQQGELERALEYTKRLLTVEPEHQRALGNLKYF 318

  Fly   242 ----------QRSHLLEARQQLEELITDGDKNGLLHLTARRPGDYHESREFRMYEQVCRGE-LAP 295
                      ::....:...:.|:..:||.|..|              .|.|.||::|||| |..
Zfish   319 DYQLAKQKKAEKEQSTKEESKKEQETSDGKKEYL--------------PEKRKYEKLCRGEGLRM 369

  Fly   296 LPSKQRNLRCRL----RKSRLGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTV 356
            .|.:|::|.||.    |.......|.|.|:....|.:::.|::|..::.:.:::.::||::|:|:
Zfish   370 TPRRQKHLFCRYFNGNRHPFYTIGPVKQEDEWDRPRIIRYHEIITEQEIEKIKELSKPRLRRATI 434

  Fly   357 YSLGGNGGSTAAAFRTSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPH 421
             |....|....|.:|.|:.|......:.....:::.:.|.:|||:..||:|||||||:||.||||
Zfish   435 -SNPITGVLETAHYRISKSAWLAAYEHPVVDRINQRIEDITGLNVKTAEELQVANYGVGGQYEPH 498

  Fly   422 WD--SFPENHIYQE-GDLHGNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSG 483
            :|  ...|...::| |.  |||:||.::|::||.|||.|.||.:...|.|.:|:.:|||||.|||
Zfish   499 FDFGRKDEPDAFKELGT--GNRIATWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVFWYNLFPSG 561

  Fly   484 DQDFRTKHAACPVLQGSKWIANVWIRERNQDNVRPCDLE 522
            :.|:.|:|||||||.|:||::|.||.||.|:..|||.|:
Zfish   562 EGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPCGLK 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..158 CDD:462433 45/140 (32%)
P4Hc 336..509 CDD:214780 72/175 (41%)
p4ha1aXP_073773811.1 None

Return to query results.
Submit another query.