DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and p4ha2

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:547 Identity:182/547 - (33%)
Similarity:295/547 - (53%) Gaps:48/547 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLAKCVLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQ---SEIDA 62
            :||:.|.::.|      ..|.|:||..:..|...|..||..|:.|:.|..:....::   ||:|.
 Frog     9 ILLSLCCIWEV------QTEVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDE 67

  Fly    63 IRVEHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQ 127
            :........:|   ||.:||||::|:||.::||.:.|..|..||:: .::......:|  .||::
 Frog    68 LSSRSTADPEG---YLGHPVNAYKLVKRFNTDWSSLENLVLQDSAK-GFIANFTFQRE--YFPTE 126

  Fly   128 DDFVGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQ 192
            :|..|:|.||.|:|.||:||...:|.|.|.|..|.:::|..|.|.:|:..|...||.|||.|:||
 Frog   127 EDETGAARALMRIQDTYKLDPDVIAKGKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQ 191

  Fly   193 SMQLL--GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPD-----QRSHLLEAR 250
            :::.:  ||.:..::...||::...|   .::|....||.|...:|:::|:     ......|..
 Frog   192 ALKQMDEGEDAVVNKVDVLDYLSYTV---FQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEKM 253

  Fly   251 QQLEELITDGDKNGLLHLTARRPG------DYHESREFRMYEQVCRGELAPL-PSKQRNLRCRL- 307
            |:.::.....:::.......|:||      ||...|:  :||.:||||...: |.:||.|.||. 
 Frog   254 QEKQKAELKQNESTNTESATRQPGVYSRPLDYLPERD--VYEALCRGEGVKMNPRRQRRLFCRYH 316

  Fly   308 ---RKSRLGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAA 369
               |...|..:|.|:|:....|.:|:....:..::...:::.|:|::.|:||.. ...|..:.|.
 Frog   317 NGNRSPYLILSPVKVEDEWDSPRIVRYLNALSDEEIAKIKELAKPKLARATVRD-PKTGVLSVAN 380

  Fly   370 FRTSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEG 434
            :|.|:.|....:.:.....::..:...:||.:|.||.|||||||:||.||||:|...::    |.
 Frog   381 YRVSKSAWLEENDDPVIARVNLRMQAITGLTVDTAELLQVANYGMGGQYEPHFDFSRKD----EP 441

  Fly   435 DLH-----GNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAAC 494
            |:.     |||:||.:.|::||||||.|.||.....:.|::|:.:|||||..||:.|:||:||||
 Frog   442 DVFKRLGTGNRVATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAAC 506

  Fly   495 PVLQGSKWIANVWIRERNQDNVRPCDL 521
            |||.||||::|.|..||.|:.:|||.|
 Frog   507 PVLVGSKWVSNKWFHERGQEFLRPCGL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 44/134 (33%)
P4Hc 336..509 CDD:214780 71/177 (40%)
p4ha2XP_012814344.2 P4Ha_N 27..113 CDD:400573 27/89 (30%)
TPR repeat 166..201 CDD:276809 13/34 (38%)
TPR repeat 206..236 CDD:276809 8/32 (25%)
P4Hc 348..521 CDD:214780 71/177 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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