DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and p4ha2

DIOPT Version :10

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:542 Identity:182/542 - (33%)
Similarity:292/542 - (53%) Gaps:46/542 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVLQVLSC----HGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQ---SEIDAIRVEH 67
            |:|..|.|    ..|.|:||..:..|...|..||..|:.|:.|..:....::   ||:|.:....
 Frog     8 LILLSLCCIWEVQTEVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRS 72

  Fly    68 LNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDDFVG 132
            ....:|   ||.:||||::|:||.::||.:.|..|..||:: .::......:|  .||:::|..|
 Frog    73 TADPEG---YLGHPVNAYKLVKRFNTDWSSLENLVLQDSAK-GFIANFTFQRE--YFPTEEDETG 131

  Fly   133 SAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSMQLL 197
            :|.||.|:|.||:||...:|.|.|.|..|.:::|..|.|.:|:..|...||.|||.|:||:::.:
 Frog   132 AARALMRIQDTYKLDPDVIAKGKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQALKQM 196

  Fly   198 --GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPD-----QRSHLLEARQQLEE 255
              ||.:..::...||::...|   .::|....||.|...:|:::|:     ......|..|:.::
 Frog   197 DEGEDAVVNKVDVLDYLSYTV---FQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEKMQEKQK 258

  Fly   256 LITDGDKNGLLHLTARRPG------DYHESREFRMYEQVCRGELAPL-PSKQRNLRCRL----RK 309
            .....:::.......|:||      ||...|:  :||.:||||...: |.:||.|.||.    |.
 Frog   259 AELKQNESTNTESATRQPGVYSRPLDYLPERD--VYEALCRGEGVKMNPRRQRRLFCRYHNGNRS 321

  Fly   310 SRLGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQ 374
            ..|..:|.|:|:....|.:|:....:..::...:::.|:|::.|:||.. ...|..:.|.:|.|:
 Frog   322 PYLILSPVKVEDEWDSPRIVRYLNALSDEEIAKIKELAKPKLARATVRD-PKTGVLSVANYRVSK 385

  Fly   375 GASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDLH-- 437
            .|....:.:.....::..:...:||.:|.||.|||||||:||.||||:|...::    |.|:.  
 Frog   386 SAWLEENDDPVIARVNLRMQAITGLTVDTAELLQVANYGMGGQYEPHFDFSRKD----EPDVFKR 446

  Fly   438 ---GNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPVLQG 499
               |||:||.:.|::||||||.|.||.....:.|::|:.:|||||..||:.|:||:|||||||.|
 Frog   447 LGTGNRVATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVG 511

  Fly   500 SKWIANVWIRERNQDNVRPCDL 521
            |||::|.|..||.|:.:|||.|
 Frog   512 SKWVSNKWFHERGQEFLRPCGL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..158 CDD:462433 45/136 (33%)
P4Hc 336..509 CDD:214780 71/177 (40%)
p4ha2XP_012814344.2 P4Ha_N 26..157 CDD:462433 45/136 (33%)
BepA 166..>247 CDD:443813 23/83 (28%)
TPR repeat 166..201 CDD:276809 13/34 (38%)
TPR repeat 206..236 CDD:276809 8/32 (25%)
P4Hc 348..521 CDD:214780 71/177 (40%)

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