DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaMP and P4ha3

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:534 Identity:168/534 - (31%)
Similarity:259/534 - (48%) Gaps:53/534 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRVEHLNAADGIDDYLNNPVNAFR 86
            ||:.:.:|:....|..||..|:.|:    :..||...::.....:.|:..:.:...:.||:.||.
Mouse    29 FSALTSVARALAPERRLLGTLRRYL----RGEEARLRDLTRFYDKVLSLHEDLKIPVVNPLLAFT 89

  Fly    87 LIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDDFVGSAIALTRLQQTYQLDVAEL 151
            |||||.|||.....|:.|..:.....|....::::|  |:.:|..|:|.||.|||..|.|:|..|
Mouse    90 LIKRLQSDWRNVVHSLEATENIRALKDGYEKVEQDL--PAFEDLEGAARALMRLQDVYMLNVKGL 152

  Fly   152 ASGILNGVKYGT-----------AMSWQDCFVLG---------QHLYALRDYNHTVPWLQQSMQL 196
            |.|:...|...:           :::..|||.:|         |..|...||.|.:|||::::.|
Mouse   153 ARGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKPSCGSRSLQVAYDTGDYYHAIPWLEEAVSL 217

  Fly   197 L----GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPDQRSHLLEARQQL--EE 255
            .    ||.....|::..|.::.:.....::|....||||....|...||.:.   .||..|  |.
Mouse   218 FRRAHGEWKTEDEASLEDALDYLAFACFQVGNVSCALSLSREFLVYSPDNKR---MARNVLKYER 279

  Fly   256 LITDGDKNGLLHLTARRPGDYH-ESREFRMYEQVCRGELAPLPSKQR--NLRCRLRKSRLGY--- 314
            |:.:...........:||...| ::|:  .||.:|: .|...|:..:  :|.|....:...|   
Mouse   280 LLAENGHQMAAETAIQRPNVPHLQTRD--TYEGLCQ-TLGSQPTHYQIPSLYCSYETNSSPYLLL 341

  Fly   315 APFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQGASFN 379
            .|.:.|.:||.||:...|..:..:::..:::.|.|.::||.|.|   ........:|.|:.|...
Mouse   342 QPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVAS---GEKQLQVEYRISKSAWLK 403

  Fly   380 YSRNAATKLLSRHVGDFSGLNMD--YAEDLQVANYGIGGHYEPHWD--SFPENHIYQEGDLHGNR 440
            .:.:.....|...:...:||::.  |||.|||.|||||||||||:|  :.|.:.:|:...  |||
Mouse   404 DTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKS--GNR 466

  Fly   441 MATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPVLQGSKWIAN 505
            :||.:.||:.|||||.|||.:....|...:.:.|||:|||.||:.|..|.||.||||.|.||:||
Mouse   467 VATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVAN 531

  Fly   506 VWIRERNQDNVRPC 519
            .||.|..|:..|||
Mouse   532 KWIHEYGQEFRRPC 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 40/131 (31%)
P4Hc 336..509 CDD:214780 70/176 (40%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 40/131 (31%)
P4Hc 363..535 CDD:214780 70/176 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839350
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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