DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaMP and P4ha2

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_006532515.1 Gene:P4ha2 / 18452 MGIID:894286 Length:557 Species:Mus musculus


Alignment Length:573 Identity:198/573 - (34%)
Similarity:304/573 - (53%) Gaps:76/573 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLAKCVLFLVLQ---VLS-CHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEID 61
            |.|...||.|::.   ||| ...|||:|...:..|...|..|:..|:.|:  :.:.|:..:.:..
Mouse     1 MKLQVLVLVLLMSWFGVLSWVQAEFFTSIGHMTDLIYAEKDLVQSLKEYI--LVEEAKLAKIKSW 63

  Fly    62 AIRVEHLNAADGID--DYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLS- 123
            |.::|.|.:....|  .||.:||||::|:|||::||......|..|:|        |....||| 
Mouse    64 ASKMEALTSRSAADPEGYLAHPVNAYKLVKRLNTDWPALGDLVLQDAS--------AGFVANLSV 120

  Fly   124 ----FPSQDDFVGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYN 184
                ||:.:|..|:|.||.|||.||:||...::.|.|.|.||...:|..|||.||:..|...||.
Mouse   121 QRQFFPTDEDESGAARALMRLQDTYKLDPDTISRGELPGTKYQAMLSVDDCFGLGRSAYNEGDYY 185

  Fly   185 HTVPWLQQSMQLL--GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPDQR---- 243
            |||.|::|.::.|  ||::..::|..||::...|   .::|....|:.|...:||::|...    
Mouse   186 HTVLWMEQVLKQLDAGEEATVTKSLVLDYLSYAV---FQLGDLHRAVELTRRLLSLDPSHERAGG 247

  Fly   244 -----SHLLEARQQLEELITDGDKNGL-----LHLTARRPGDYHESREFRMYEQVCRGELAPL-P 297
                 ..|||  ::..:.:::....||     |:   .||.||...|:  :||.:||||...| |
Mouse   248 NLRYFERLLE--EERGKSLSNQTDAGLATQENLY---ERPTDYLPERD--VYESLCRGEGVKLTP 305

  Fly   298 SKQRNLRCRL----RKSRLGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYS 358
            .:|:.|.||.    |..:|..||||.|:....|.:|:.:.|:..::.:.:::.|:|::.|:||..
Mouse   306 RRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRD 370

  Fly   359 LGGNGGSTAAAFRTSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWD 423
             ...|..|.|::|.|:.:......:.....::|.:...:||.:..||.|||||||:||.||||:|
Mouse   371 -PKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFD 434

  Fly   424 ----SFPENHIYQEGDL------------------HGNRMATGIYYLADVEAGGGTAFPFLPLLV 466
                .| ::.:..||:.                  .|||:||.:.|::||||||.|.||.|...:
Mouse   435 FSRRPF-DSGLKTEGNRLATFLNYSDEQDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAI 498

  Fly   467 TPERGSLLFWYNLHPSGDQDFRTKHAACPVLQGSKWIANVWIRERNQDNVRPC 519
            .|::|:.:|||||..||:.|:||:|||||||.|.||::|.|..||.|:.:|||
Mouse   499 WPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPC 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 45/138 (33%)
P4Hc 336..509 CDD:214780 72/194 (37%)
P4ha2XP_006532515.1 P4Ha_N 28..157 CDD:369820 45/138 (33%)
P4Hc 348..541 CDD:214780 72/194 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3267
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.880

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