DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaMP and P4ha1

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001303300.1 Gene:P4ha1 / 18451 MGIID:97463 Length:534 Species:Mus musculus


Alignment Length:545 Identity:177/545 - (32%)
Similarity:296/545 - (54%) Gaps:39/545 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLAKCVLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRV 65
            |:....::.::|.....|..||:|...:..|...|..|:..|::|:.......|.::...:.:..
Mouse     1 MIWVVLMMAILLPQSLAHPGFFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDR 65

  Fly    66 EHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDDF 130
            ....|....:.::.:|||||:|:|||:::|...|..:..|.| ..::..:...::  .||:.:|.
Mouse    66 LTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLILKDMS-DGFISNLTIQRQ--YFPNDEDQ 127

  Fly   131 VGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSMQ 195
            ||:|.||.|||.||.||...::.|.|.||::.:.::.:|||.||:..|...||.||..|::|::.
Mouse   128 VGAAKALFRLQDTYNLDTNTISKGNLPGVQHKSFLTAEDCFELGKVAYTEADYYHTELWMEQALT 192

  Fly   196 LL--GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPD-QRSH-------LLEAR 250
            .|  ||.|...:.:.||::...|   .:.|..:.||.|...:|.::|: ||::       .:.::
Mouse   193 QLEEGELSTVDKVSVLDYLSYAV---YQQGDLDKALLLTKKLLELDPEHQRANGNLVYFEYIMSK 254

  Fly   251 QQLEELITDGDKNGLLHLTA-RRPG---DYHESREFRMYEQVCRGE-LAPLPSKQRNLRCRL--- 307
            ::.......||::.  ..|| ::.|   ||...|:  .||.:|||| :...|.:|:.|.||.   
Mouse   255 EKDANKSASGDQSD--QKTAPKKKGIAVDYLPERQ--KYEMLCRGEGIKMTPRRQKRLFCRYHDG 315

  Fly   308 -RKSRLGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFR 371
             |..:...||.|.|:....|.:::.|.:|...:.:.::..|:||:.|:||:. ...|..|.|.:|
Mouse   316 NRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHD-PETGKLTTAQYR 379

  Fly   372 TSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDL 436
            .|:.|..:...:.....::..:.|.:||::..||:|||||||:||.||||:|...::    |.|.
Mouse   380 VSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKD----EPDA 440

  Fly   437 H-----GNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPV 496
            .     |||:||.::|::||.|||.|.||.:...|.|::|:.:|||||..||:.|:.|:||||||
Mouse   441 FRELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

  Fly   497 LQGSKWIANVWIRERNQDNVRPCDL 521
            |.|:||::|.|:.||.|:..|||.|
Mouse   506 LVGNKWVSNKWLHERGQEFRRPCTL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 37/131 (28%)
P4Hc 336..509 CDD:214780 71/177 (40%)
P4ha1NP_001303300.1 P4Ha_N 24..153 CDD:285528 37/131 (28%)
TPR 205..238 9/35 (26%)
P4Hc 345..518 CDD:214780 71/177 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

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