DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and phy-2

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:548 Identity:178/548 - (32%)
Similarity:294/548 - (53%) Gaps:42/548 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIR----- 64
            :.||.:.|.....|.:.|::.:.|..:...|       ::....|:|:.||.::.:|.:|     
 Worm     2 RAVLLVCLLAGLAHADLFTAIADLQHMLGAE-------KDVTTIIDQYIEAERARLDDLRRYAHE 59

  Fly    65 VEHLNA-ADGI-DDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMAS--LKENLSFP 125
            ..|.|| |:.: .:::.||:||:.|||||.::|:..| ::..::..|.:|..:..  ::..:.||
 Worm    60 YVHRNAHAESVGPEFVTNPINAYLLIKRLTTEWKKVE-NIMLNNKASTFLKNITDNRVRSEVKFP 123

  Fly   126 SQDDFVGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWL 190
            .::|..|:|.||.|||.||.||..:|::||:.|.|....:|..|.|.:|:..|..:||.|.:.|:
 Worm   124 GEEDLSGAATALLRLQDTYSLDTLDLSNGIIGGEKVSNKLSGHDTFEVGRSAYNQKDYYHCLMWM 188

  Fly   191 QQSMQLLGEQSYGSESASLDFMEAVVEYHR----EMGAHESALSLVNHVLSIEPDQRSHLLEARQ 251
            |.::..:..::    ..:::..| ::||..    :.|....||||...:..|.|:..    .|:.
 Worm   189 QVALVKIENEN----PPTIEEWE-ILEYLAYSLYQQGNVRRALSLTKRLAKIAPNHP----RAKG 244

  Fly   252 QL---EELITDGDKNGLLHLTARRPGDYHESREFRMYEQVCRGELAPLPSKQRN-LRCRLRKSR- 311
            .:   |:::...|..|.|.....:..:|....|...||.:||||:.|:..|.:| |||.|::.: 
 Worm   245 NVKWYEDMLQGKDMVGDLPPIVNKRVEYDGIVERDAYEALCRGEIPPVEPKWKNKLRCYLKRDKP 309

  Fly   312 -LGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQG 375
             |..||.|:|.|..|||.|....||...:.:.:::.|.|::||:||.: ...|....|.:|.|:.
 Worm   310 FLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQN-SKTGELEHATYRISKS 373

  Fly   376 ASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWD--SFPENHIYQEGDLHG 438
            |......:.....::|.:.||:.||...:|:|||||||:||||:||:|  ...|.:.::..:. |
 Worm   374 AWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNT-G 437

  Fly   439 NRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPVLQGSKWI 503
            ||:||.::|::..|.||.|.|..|...|.|.:...||||||...|:.|.||:|||||||.|.||:
 Worm   438 NRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWV 502

  Fly   504 ANVWIRERNQDNVRPCDLERGQEISLHY 531
            :|.||.|:.|:..|||.||  :|:..::
 Worm   503 SNKWIHEKGQEFTRPCGLE--EEVQENF 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 41/140 (29%)
P4Hc 336..509 CDD:214780 68/174 (39%)
phy-2NP_502317.1 P4Ha_N 21..154 CDD:285528 41/140 (29%)
TPR_16 169..240 CDD:290168 18/75 (24%)
P4Hc 335..508 CDD:214780 68/174 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

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