DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaMP and dpy-18

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_499464.1 Gene:dpy-18 / 176569 WormBaseID:WBGene00001077 Length:559 Species:Caenorhabditis elegans


Alignment Length:547 Identity:175/547 - (31%)
Similarity:275/547 - (50%) Gaps:59/547 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVLQVLSCHG----EFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQ------SEIDAIR 64
            |.|.||:..|    :.|:|.:.:..|.|||..:...|..|:::..:....|:      |:.:.|.
 Worm     3 LALLVLATIGYAVADLFTSIADMQNLLETERNIPKILDKYIHDEEERLVQLKKLSEEYSKKNEIS 67

  Fly    65 VEHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDD 129
            :|     :|:.| :.||:|||.||||...||:..|..:.|:.: .|.:.::......:.:|:.||
 Worm    68 IE-----NGLKD-ITNPINAFLLIKRKIFDWKEIESKMNANKA-GNVVSSITDDSYGVRYPTADD 125

  Fly   130 FVGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSM 194
            ..|:||.|.|||.||:||..:||.|.:...:.....|.:|||.:.:..|...|:.|||.|::::.
 Worm   126 LSGAAIGLLRLQDTYRLDTKDLADGKIYADQGNYTFSAKDCFEIARAAYNEHDFYHTVMWMEEAQ 190

  Fly   195 QLLGEQSYGSESASLDFME--AVVEYHREMGAHESALSLVNHVLSIEPDQRSH------------ 245
            :.||::...:.... |.:|  |...|.:....|  ||.|...:..:.|   :|            
 Worm   191 RRLGDEVEPTVEVE-DILEYLAFALYKQNNLKH--ALKLTEELYKMNP---THPRAKGNVKWYED 249

  Fly   246 LLEARQQLEELITDGD-KNGLLHLTARRPGDYHESREFRMYEQVCRGELAPLPSKQ-RNLRCRLR 308
            |||     :|.:...| :..|..:..|||.....:.|..|||.:||.|: |:..|. ..|.|..:
 Worm   250 LLE-----QEGVRRSDMRKNLPPIQNRRPDSVLGNTERTMYEALCRNEV-PVSQKDISRLYCYYK 308

  Fly   309 KSR--LGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFR 371
            :.|  |.|||.|:|....:||.|....||...:..::|:.|:|::.|:||:. ...|....|.:|
 Worm   309 RDRPFLVYAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHD-SVTGKLVTATYR 372

  Fly   372 TSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDL 436
            .|:.|..........:.:::.:|..:.|.|:.||:||:|||||||||:||:|     |..:|...
 Worm   373 ISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFD-----HAKKEESK 432

  Fly   437 H------GNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACP 495
            .      |||:||.::|::....||||.|......:.|.:...||||||:..||.:..|:|||||
 Worm   433 SFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKSTILPTKNDALFWYNLYKQGDGNPDTRHAACP 497

  Fly   496 VLQGSKWIANVWIRERNQDNVRPCDLE 522
            ||.|.||::|.||.|:..:..|||.|:
 Worm   498 VLVGIKWVSNKWIHEKGNEFRRPCGLK 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 44/137 (32%)
P4Hc 336..509 CDD:214780 65/178 (37%)
dpy-18NP_499464.1 P4Ha_N 21..152 CDD:285528 44/137 (32%)
P4Hc 338..511 CDD:214780 65/178 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

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