DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and p4ha3

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_031752143.1 Gene:p4ha3 / 100495824 XenbaseID:XB-GENE-962355 Length:547 Species:Xenopus tropicalis


Alignment Length:556 Identity:173/556 - (31%)
Similarity:266/556 - (47%) Gaps:68/556 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAKCVLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRVEH 67
            |..||.:  |..|....:.:||.:.:.:....|..||..|..|:.:..|....|:...:.::..|
 Frog    15 LLLCVSW--LHWLHAGADMYSSMASIQQAVGMEGALLQHLGQYLQQETQRLSDLRRFYEKVQASH 77

  Fly    68 LNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENL-----SFPSQ 127
            ......:.|    |:.|:.|:|||.|:|..     ...||.:|  :.:.:|||..     ..|:.
 Frog    78 QAGGPPVQD----PILAYTLLKRLQSEWMN-----VVHSSEAN--ENIQALKEGYEKVKQDLPAP 131

  Fly   128 DDFVGSAIALTRLQQTYQLDVAELASG-----------ILNGVKYGTAMSWQDCFVLGQHLYALR 181
            :|..|:|.||.|||..|.|:|..||.|           :|....:.:.||..|||.:|:..|.:.
 Frog   132 EDVEGAAKALMRLQDVYSLNVNGLARGMFQRSSSSDTKLLYNPPHLSIMSADDCFHIGKVAYDME 196

  Fly   182 DYNHTVPWLQQSMQLLGEQSYGS----ESASLDFMEAVVEY----HREMGAHESALSLVNHVLSI 238
            ||.|::|||::::... ..|||:    :..||   |..::|    :.:.|....||.|....|..
 Frog   197 DYYHSIPWLEEAVSRF-RGSYGNWRTEDEGSL---EEALDYLAFSYYKAGNISHALDLSRECLLY 257

  Fly   239 EPDQ---RSHLLEARQQLEELIT-DGDKNGLLHLTARRPGDYH-ESREFRMYEQVCR--GELAPL 296
            :||.   ..::.:..|.|.|..| |.|..   .:..:||...| ::|:  :||.:|:  |. .|.
 Frog   258 DPDNGRLARNIAKYEQILYESPTADADAE---EMKLQRPNVTHLKTRD--LYEGLCQTLGS-QPT 316

  Fly   297 PSKQRNLRCRLRKSRLGY---APFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYS 358
            ..:..::.|....:...|   .|.|.|.:.|.|.||..|..:...:::.:::.|.|.:.||.|.|
 Frog   317 SYEDPHMSCMYDTNSHPYLLLQPMKKEIVSLRPQVVLYHDFVSDLEAEKIKELASPWLHRSVVAS 381

  Fly   359 LGGNGGSTA-AAFRTSQGASFNYSRNAATKLLSRHVGDFSGLNM--DYAEDLQVANYGIGGHYEP 420
                |...| |.:|.|:.|....:.:...:.|...:...:|||.  .|||.|||.||||||||||
 Frog   382 ----GEKQAEAEYRISKSAWLKDTIHPFVQNLDTRISAVTGLNAHPPYAEYLQVVNYGIGGHYEP 442

  Fly   421 HWD--SFPENHIYQEGDLHGNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSG 483
            |:|  :..::.:|:...  |||:||.:.||:.|:.||.|||.|........:.:.:||:|||.:|
 Frog   443 HFDHATSRKSPLYRTNT--GNRLATFMIYLSHVDLGGSTAFVFANFSSPVVKNAAVFWWNLHRNG 505

  Fly   484 DQDFRTKHAACPVLQGSKWIANVWIRERNQDNVRPC 519
            ..|..|.||.|||:.||||:||.||.|..|:..|||
 Frog   506 LGDEDTLHAGCPVIIGSKWVANKWIHEFGQEFHRPC 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 39/147 (27%)
P4Hc 336..509 CDD:214780 69/177 (39%)
p4ha3XP_031752143.1 P4Ha_N 35..>104 CDD:400573 17/77 (22%)
TPR repeat 182..210 CDD:276809 11/27 (41%)
TPR repeat 215..257 CDD:276809 12/44 (27%)
P4Hc 359..531 CDD:214780 69/177 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I9960
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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