DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and p4ha1

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:538 Identity:189/538 - (35%)
Similarity:301/538 - (55%) Gaps:42/538 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFLVLQVL---SC-HGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRVEHL 68
            :.|||.:|   || |.:||:|...:..|..||..|:..|::|:....|....::...|  :::||
 Frog     3 IHLVLPLLGLFSCAHADFFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWAD--KLDHL 65

  Fly    69 --NAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDDFV 131
              .|....:.||.:|||||:|:|||:::|...|..:..|.| ..::..:...::  .||:.:|..
 Frog    66 TDTATKDPEGYLGHPVNAFKLMKRLNTEWVKLENLILKDIS-DGFISNLTIQRQ--YFPNDEDQT 127

  Fly   132 GSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSMQL 196
            |:|.||.|||.||.||...::.|.|.|||:.|:::.:|||.||:..|...||.||..|::|::..
 Frog   128 GAAKALLRLQDTYNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQALSQ 192

  Fly   197 L--GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPD-QRS-----HLLEARQQL 253
            |  ||:|...:...||::...|   .:.|..:.||:|....|.::|: ||.     |::.  ::.
 Frog   193 LDAGEESSLDKVMVLDYLSYAV---YQQGDLDKALTLTKRSLELDPEHQRGNGNLRHIMS--KES 252

  Fly   254 EELITDGDKNGLLHLTARRPGDYHESREFRMYEQVCRGELAPLPS-KQRNLRCRL----RKSRLG 313
            .:..:...:...|.....||.|:.|..:   ||::||||...:.| :|:.|.||.    :...|.
 Frog   253 NKSSSSPSEGAELRTRKGRPKDHLEKEK---YEKLCRGEGVKMTSRRQKRLFCRYFDGKKDPLLI 314

  Fly   314 YAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQGASF 378
            .:|.|.|:....|.:|:.|.:|..::...:::.|:||::|:|: |....|....|.:|.::.|..
 Frog   315 LSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATI-SNPITGVLETAQYRITKSAWL 378

  Fly   379 NYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDLH-----G 438
            :...:.....|:|.:...:||:|..||:||||||||||.||||:|...:    .|.|..     |
 Frog   379 SGYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDFLRK----YEPDAFKKLGTG 439

  Fly   439 NRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPVLQGSKWI 503
            ||:||.::|::||||||.|.||.:...|.|::|:.:|||||..||:.|:.|:|||||||.|:||:
 Frog   440 NRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLVGNKWV 504

  Fly   504 ANVWIRERNQDNVRPCDL 521
            :|.||.||.|:..|||:|
 Frog   505 SNKWIHERGQEFRRPCNL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 42/133 (32%)
P4Hc 336..509 CDD:214780 73/177 (41%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 26/89 (29%)
P4Hc 337..510 CDD:214780 73/177 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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