DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaMP and p4ha1b

DIOPT Version :9

Sequence 1:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_999856.1 Gene:p4ha1b / 100003675 ZFINID:ZDB-GENE-030131-4089 Length:536 Species:Danio rerio


Alignment Length:544 Identity:187/544 - (34%)
Similarity:304/544 - (55%) Gaps:35/544 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLAKCVLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRV 65
            |:||..:|..:...|..|.:||:||..:..|...|..|:..|:.|:.:.....|.::...|.:..
Zfish     1 MMLAWFLLSFLFHFLYAHNDFFTSTGQMTDLLYAEKDLVTSLKEYIKQEENRLEQVKEWADKLDS 65

  Fly    66 EHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDDF 130
            ..:.|....:.:|.:|||||:|:|||:|:|...|..|..|:: :.::..:...::  .||:.:|.
Zfish    66 LTITATQDPEGFLGHPVNAFKLMKRLNSEWSDLENLVLKDTT-NGFISNLTVQRQ--YFPTDEDQ 127

  Fly   131 VGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSMQ 195
            .|:|.||.|||.||||....::||.|.||.:.:.|:.:||:.||:..|:..||.||..|:.|::.
Zfish   128 TGAAKALLRLQDTYQLSANAISSGDLPGVVHKSRMTVEDCYELGKIAYSDADYYHTELWMAQALS 192

  Fly   196 LL--GEQSYGSESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPDQR---------SHLLEA 249
            .|  ||:|...:...:|::...:   .:.|..:.||.|...:|.::|:..         ...||.
Zfish   193 QLDEGEESPIDKVTVMDYLSYAI---YQQGELDRALELTKRMLKLDPNHHRANGNLKYFEFQLEK 254

  Fly   250 RQQLEELITDGDKNGLLHLTARRPGDYHESR----EFRMYEQVCRGELAPL-PSKQRNLRCRL-- 307
            :::.|....:.|:..:|.   :|......|:    |.:.||::||||...| |.:|..|.||.  
Zfish   255 QRKAENEKKEEDQKRVLD---KRDAQRKRSKDPLPERKKYERLCRGEGIKLTPRRQSRLFCRYSN 316

  Fly   308 --RKSRLGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAF 370
              |..||..||.|.|:....|.:|:.|::|...:.:::::.|:||::|:|: |....|....|.:
Zfish   317 NNRNPRLLLAPVKQEDEWDRPRIVRYHEIISDSEIETVKEMAKPRLRRATI-SNPITGVLETAPY 380

  Fly   371 RTSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWD--SFPENHIYQE 433
            |.|:.|..:...::..:.:::.:.|.:||.||.||:|||||||:||.||||:|  ...|...::|
Zfish   381 RISKSAWLSGYEHSTIERINQRIEDVTGLEMDTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKE 445

  Fly   434 -GDLHGNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPVL 497
             |.  |||:||.::|::||.|||.|.|..:...|.|::|:.:|||||.|||:.|:.|:|||||||
Zfish   446 LGT--GNRIATWLFYMSDVSAGGATVFTDVGAAVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVL 508

  Fly   498 QGSKWIANVWIRERNQDNVRPCDL 521
            .|:||::|.||.||.|:..|||.|
Zfish   509 VGNKWVSNKWIHERGQEFRRPCAL 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 41/131 (31%)
P4Hc 336..509 CDD:214780 73/175 (42%)
p4ha1bNP_999856.1 P4Ha_N 24..153 CDD:285528 41/131 (31%)
TPR repeat 164..199 CDD:276809 13/34 (38%)
TPR_16 168..238 CDD:290168 20/72 (28%)
TPR repeat 204..234 CDD:276809 6/32 (19%)
P4Hc 347..520 CDD:214780 73/175 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.930

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