DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaSG2 and AT5G66060

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_201407.4 Gene:AT5G66060 / 836738 AraportID:AT5G66060 Length:289 Species:Arabidopsis thaliana


Alignment Length:273 Identity:78/273 - (28%)
Similarity:115/273 - (42%) Gaps:68/273 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 VPGKNVQETKPSWFSNYTRLCQGRRLPEERSGDPLRCYLDGKRHAYFTLAPLQVEPVHLDPDINV 329
            ||..|...:|.:..::..|    :.|  :|||:.     |.|...:       ||.:..:|..:|
plant    43 VPSNNAGSSKANDLTSIVR----KTL--QRSGED-----DSKNERW-------VEIISWEPRASV 89

  Fly   330 YHGMLSSKQILSIFEEADKEEMVRSAVAG-SGGEGTVRDLRVSQQTWL----DYKSPVMNSVGRI 389
            ||..|:.::...:.|.| |..|.:|.|.. ..|:.|...:|.|..|:|    |      .::..|
plant    90 YHNFLTKEECKYLIELA-KPHMEKSTVVDEKTGKSTDSRVRTSSGTFLARGRD------KTIREI 147

  Fly   390 IQFVSGFDMAGAEH---MQVANYGVGGQYEPHPDYFEVNLPKNFEGDRISTSMFYLSDVEQGGYT 451
            .:.:|.|.....||   :||.:|.:|.:||||.|||.........|.||:|.:.||||||:||.|
plant   148 EKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVLMYLSDVEEGGET 212

  Fly   452 VFTKLNVFLPPVKG---------------------------ALVMWHNLHRSLHVDARTLHAGCP 489
            ||       |..||                           ||:.| ::.....:|..:||.||.
plant   213 VF-------PAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFW-SMTPDATLDPSSLHGGCA 269

  Fly   490 VIVGSKRIGNIWM 502
            ||.|:|.....|:
plant   270 VIKGNKWSSTKWL 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433
CpoB <178..263 CDD:441335
P4Hc 335..503 CDD:214780 60/203 (30%)
AT5G66060NP_201407.4 PLN00052 74..288 CDD:177683 67/231 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.