DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and AT3G28490

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_189490.2 Gene:AT3G28490 / 822479 AraportID:AT3G28490 Length:288 Species:Arabidopsis thaliana


Alignment Length:215 Identity:59/215 - (27%)
Similarity:96/215 - (44%) Gaps:24/215 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 FTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAG--SGGEGTVRDLRVSQQ 373
            |::.|.::..:...|...:|.|.||.::...:.:.| |.::.:|.|..  ..||....::|.|..
plant    25 FSVDPTRITQLSWTPRAFLYKGFLSDEECDHLIKLA-KGKLEKSMVVADVDSGESEDSEVRTSSG 88

  Fly   374 TWLDYKSP--VMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFEGDRIS 436
            .:|..:..  |.|...::..: :.......|.:|:.:|..|.:|:||.|||.........|.||:
plant    89 MFLTKRQDDIVANVEAKLAAW-TFLPEENGEALQILHYENGQKYDPHFDYFYDKKALELGGHRIA 152

  Fly   437 TSMFYLSDVEQGGYTVF------------------TKLNVFLPPVKGALVMWHNLHRSLHVDART 483
            |.:.|||:|.:||.|||                  .|....:.|.||..:::.|||.:...|..:
plant   153 TVLMYLSNVTKGGETVFPNWKGKTPQLKDDSWSKCAKQGYAVKPRKGDALLFFNLHLNGTTDPNS 217

  Fly   484 LHAGCPVIVGSKRIGNIWMH 503
            ||..||||.|.|.....|:|
plant   218 LHGSCPVIEGEKWSATRWIH 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433
CpoB <178..263 CDD:441335
P4Hc 335..503 CDD:214780 52/189 (28%)
AT3G28490NP_189490.2 PLN00052 28..288 CDD:177683 58/212 (27%)
Blue background indicates that the domain is not in the aligned region.

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