DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and p4htmb

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_001340234.2 Gene:p4htmb / 799930 ZFINID:ZDB-GENE-110131-7 Length:510 Species:Danio rerio


Alignment Length:336 Identity:74/336 - (22%)
Similarity:121/336 - (36%) Gaps:118/336 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 LESQPTHSAQQTQKYLESRVPGKNVQETKPSWFSNYTRLCQGRRLPEERSG---DPLRCYLDGKR 307
            |:.|...|.::...:|:....|    :.:|.....::|:..|..|..|...   |.|:..|||  
Zfish   195 LDQQLNLSPEEIFNFLDLNQDG----QLQPHEILTHSRVRDGIWLTSENLKEIYDGLKADLDG-- 253

  Fly   308 HAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEA----------DKEEMVRSA-----VA 357
                                   :|:||.::...:..:|          ::.::||::     ..
Zfish   254 -----------------------NGLLSLEEFGRLRSDAFQRFLLQRGVERSQLVRNSRHTWLYQ 295

  Fly   358 GSGGEGTVRDLRVSQQTWLDYKSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPH---- 418
            |.|....::|||  ::..|..:.|     ..:::.        :|.:||..|..||.|..|    
Zfish   296 GQGAHQVLQDLR--KRVTLLTRLP-----SSLVEL--------SEPLQVVRYEQGGHYHAHHDSG 345

  Fly   419 PDYFE---------VNLPKNFEGD-RISTSMFYLSDVEQGGYTVF-------------------- 453
            |.|.|         .|....|:.. |..|.:|||::|::||.|.|                    
Zfish   346 PVYPETACTHTRLAANTTSPFQTSCRYITVLFYLNNVQEGGETTFPVADNRTYEEASLIQNDVDL 410

  Fly   454 -------TKLNVFLPPVKGALVMWHNLHRSLHVDAR---------TLHAGCPVIVGSKRIGNIWM 502
                   .|.|:.:.||||..|.|:|...    |.|         :||.||.|..|:|.:.|.|:
Zfish   411 LDTRKHCDKGNLRVKPVKGTAVFWYNYLS----DGRGWVGEQDEYSLHGGCVVTQGTKWVANNWI 471

  Fly   503 H--SGYQEFRR 511
            :  ..||...|
Zfish   472 NVDPDYQRQAR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528
P4Hc 335..503 CDD:214780 54/232 (23%)
p4htmbXP_001340234.2 EF-hand_7 204..262 CDD:290234 15/86 (17%)
EFh 204..262 CDD:298682 15/86 (17%)
P4Hc 285..471 CDD:214780 51/204 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583453
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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